Rhizobium sp. Y9: BLX90_05420
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Entry
BLX90_05420 CDS
T11041
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rhiy Rhizobium sp. Y9
Pathway
rhiy00550
Peptidoglycan biosynthesis
rhiy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhiy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BLX90_05420
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhiy01002
]
BLX90_05420
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhiy01011
]
BLX90_05420
Enzymes [BR:
rhiy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BLX90_05420
Peptidases and inhibitors [BR:
rhiy01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
BLX90_05420
Peptidoglycan biosynthesis and degradation proteins [BR:
rhiy01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
BLX90_05420
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AUC11166
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Position
1:1116034..1117206
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AA seq
390 aa
AA seq
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MRKTFHRSYLSAVAAAAFAFLSAGAAQSQTAPFIAKAEQAYMIDAETGTVLLAQNEDQSF
PPASLAKLMTVEVVLDALSKGQLASETVYPVSEYAWRTGGAPSRTSTMFAALKSSVGIND
LLTGIIVQNANDGCIIIAEGMAGSDAAFAKRMTARAGELGMNRSTFANSTGLPDSGNQTT
ARDMVRLAQHLHDTYPDRYSLFTKPDFEWNRIFQRNKNTLLMPGSGIDGLGLGFAEGSGF
AAVVSAEREGRRIYLALAGIADDKTRQEEARRVVDWGLTAFEKRRLFSKDEVVGSVSVYG
GDASYVDLSPKDDISVLVPVNNPERLSGRIVYRWPLNAPLDVGANAGTLKIFSGERLLRE
VPLYTKSRVNKGSLTQNAAGALKELLLFWL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagacctttcatcgctcctatctgtcggccgtcgcggcggccgcttttgcattt
ttgagcgcaggcgcggcgcaatcgcagacagcgcccttcatcgccaaggccgagcaggcc
tatatgatcgatgccgaaaccggtacggtgcttcttgcccaaaatgaggatcagtccttt
ccgcccgcatcacttgccaagctgatgacggtggaggtggtgctggatgcgctgtcgaaa
ggacagctggcgtcggaaacggtctatcccgtttcggaatatgcctggcgcacgggcggg
gccccatcgcgaacgtcaaccatgttcgccgccctgaaatcctccgttggcatcaatgac
cttttgaccggaatcatcgtgcagaacgccaatgacggctgcatcatcatcgccgaaggc
atggcgggatcggacgctgcctttgccaagcgcatgacggcacgggccggcgaacttggc
atgaaccgcagcacgtttgccaattccaccggacttcccgattccggaaaccagacgact
gccagggacatggtgcgccttgcccagcatctgcatgacacctatccagaccgctactcg
ttgtttacgaagccggacttcgaatggaaccggattttccagcgcaacaagaacacgttg
ctgatgccgggaagcggtatagacggtcttggcctcggttttgcagaaggcagcggtttt
gccgccgtggtttcggcggagcgggaagggcgccgcatttatctggcgcttgccggcatc
gcagacgacaagacgcggcaggaggaagcgcgcagagtggtggactggggcctgaccgcc
ttcgaaaaacgccgcctgttcagcaaggatgaagtggttggctccgtcagcgtgtatggc
ggcgatgcctcctatgtcgacctttctccgaaggacgatatcagcgtcctggtgcccgtc
aacaatccggaacgcctctccggacgtatcgtctatcgctggccgctgaacgcgccgctc
gatgtcggggcgaatgccggaacgctgaagatattctcgggcgagcgtctattgcgcgaa
gtgccgctctatacgaagagccgggtgaacaaggggtcgctcacccagaatgccgcagga
gcattgaaggaacttctgctgttctggctgtga
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