Rhizobium sp. Y9: BLX90_09680
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Entry
BLX90_09680 CDS
T11041
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rhiy Rhizobium sp. Y9
Brite
KEGG Orthology (KO) [BR:
rhiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhiy03009
]
BLX90_09680
Enzymes [BR:
rhiy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
BLX90_09680
Ribosome biogenesis [BR:
rhiy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BLX90_09680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
DUF7489
ThiS
PhoU
Motif
Other DBs
NCBI-ProteinID:
AUC10447
LinkDB
All DBs
Position
1:1992872..1993894
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AA seq
340 aa
AA seq
DB search
MNDPFKQGGDARKVLIAGEDAEGRLDSWLAGEVGSDFSRSRLKALIEQGAVSLNGKPVTE
PKKKVHPGDRIEIVMPEPEDPEPKGEDIPLNVEYEDEDLIVLVKPAGLVVHPGAGNWTGT
LVNALIHHCGDSLSGIGGVKRPGIVHRLDKETSGVMVVAKNDNAHRHLAAQFADHGRTGP
LERAYKAIVWGRPRTLRGTIDAALGRSVDRTKRAVKHEDSDDAREAITHYEVVERYHERP
DATCLASMVECRLETGRTHQIRVHMAHIGHPLIGDPEYGAAFRTKANLLEEPAKSIVGRF
PRQALHAYLLAFEHPRTGEVMEFETELPEDMEALVAALRA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacccctttaaacaaggcggagacgcaaggaaagtcctgattgccggggaagac
gccgaaggccgcctcgattcctggctggcgggcgaagtgggcagcgacttctcccgcagc
cgcctgaaggcgctgatcgaacagggcgcggtttccctcaacggcaagccggtgaccgag
ccgaaaaagaaggtgcatcccggcgaccgtatcgagatcgtcatgcccgagccggaagac
ccggaacccaagggcgaggacattcccctcaacgtggaatatgaggatgaagacctgatc
gtgctcgtcaagcccgccggcctcgtcgtgcatcccggcgccggcaactggacgggaacg
ctggtcaacgccctcattcatcattgcggcgacagcctctccggcattggcggcgtcaag
cgcccgggcatcgtacaccggctggacaaggaaacgtcaggtgtcatggtcgttgcgaag
aacgacaacgcccaccggcatctggccgcgcaatttgccgaccatggccgcaccgggccg
ctggaacgcgcctacaaggccatcgtctggggccgcccgcgcacgctgcgtggcacaatc
gacgcagcgctcggccgcagcgtcgaccgcaccaaacgcgccgtcaagcacgaggattcg
gatgatgcccgcgaggcaatcacccattacgaggtagtcgagcgttatcacgagcggccg
gacgccacctgtctcgcctcgatggtggaatgccgtctcgaaacgggccgcacccaccag
atccgcgtgcacatggcccatatcggccatccgctgatcggcgatcccgaatatggcgcg
gccttccgtaccaaggcgaaccttctggaagaaccggcaaagagcatcgtcgggcgcttt
ccgcgccaggcactgcatgcctatctgctcgctttcgaacacccccgcaccggcgaggtg
atggagttcgaaaccgagcttccagaagacatggaagccttggtcgccgcattgcgtgcc
tga
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