Rhizobium sp. Y9: BLX90_11750
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Entry
BLX90_11750 CDS
T11041
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rhiy Rhizobium sp. Y9
Brite
KEGG Orthology (KO) [BR:
rhiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhiy03400
]
BLX90_11750
Enzymes [BR:
rhiy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLX90_11750
DNA repair and recombination proteins [BR:
rhiy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BLX90_11750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
NPHP3_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AUC10822
LinkDB
All DBs
Position
1:complement(2452657..2456214)
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AA seq
1185 aa
AA seq
DB search
MTIDPFDAGPAADTPESWIDWTSARQRLASDPASSAWVSANAGSGKTHVLTQRVIRLLLA
GCRPSAILCLTYTKAAASEMSSRVFDRLAEWATLPDSDLKDRIAAIEGKAPDRIKLAEAR
RLFAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAATTLLAEARRSLLT
AVSTESDADLAQALAYVLDLADESGLEALLSAIIANRSALRAFLLDAKQSGGIDARLRQA
MQIADGETEETAAAAFWPLPGLSGLALDTYLTLADEVGGSRVIDVAYALREAKRQPDPVR
RMEFIEAALLTAKGEKKSDAYVINKGMQKSAPELLDALTLARDHVVSCRNRYRLVRMLAA
TKCALVLAERLIGDFEDLKKQRSQLDFEDLIERAANLLNRDTAGAWVHYKLDQGIDHILV
DEAQDTSPVQWSIIQSLAADFFTGESARMGRRTLFAVGDEKQSIYSFQGARPERFSQERE
ETKRRVDSVEQAFHRIRLPLSFRSTEDVLAAVDQVFSDPNNASGLSADNEPVEHRSNRAG
HPGTVEVWDMVAPETTEDEEDWTAPFDALRESAPATIIARRIAARIADMIGRETIIEKGV
ERAIEPGDILVLVRKRHAFVNALTRELKRRKNIPVAGADRLRLTDHIAVQDLLALGHFVV
LPEDDLSLAALLKSPLFNLTEDDVFDIAAMRSETESVWKRLQILAQEDNSHLSSVTAKLE
GFIALSKTATVHDFFAAVLTLHDGRKKFLGRLGNEASDVLDEFLSFALDHERTGLPGLQA
FLSVLGTDSPEVKREQDKDRGEVRIMTVHASKGLEAPVVFVVDGGSKAFNHSHVPKLRFV
EAGEDAFPVWLPGSGFSNHLIRSDEERLKTAAEDEYRRLLYVAMTRAADHLVVCGYRGQK
ENPECWHAIVKKALANNEDHCKPQLFTADGEEWQGLVWRKSEPRSTPVPQRPSETPQQED
YALPAGLLTPLPVLPSLPRPLSPSGAGTIIDDGADDLAVRSPLFGEKAEVSSLALQRGRL
VHRMLQALPDFPEVEREEAARRYAERAARFWPVTEREQLVRAVLRVMSEPAVQPAFSANS
RAEVSIMGTMALGRQQYAVSGRIDRLAVEGDRVILIDYKTNRVPPREAREIPFSHTAQLA
IYREILAPLYPGKEFVCALIYTENAAFITVGDDAMREALAAIKTK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgatcctttcgacgccggccccgccgccgacacacctgaaagctggatcgac
tggaccagcgcccggcagcggcttgcttccgatcccgccagttccgcctgggtgtcggcc
aatgccggttccggcaagacccacgtactgacccagcgcgtcatccgcctgcttctggct
ggctgccggccttcggcgatcctctgcctcacctataccaaggctgcagcgtcggaaatg
tcgagccgcgtcttcgaccgtctggcggaatgggctactttgccggattccgatctcaag
gaccgcatcgccgccatcgaaggcaaggcgccggatcgcatcaagctcgccgaggcgcgc
aggctcttcgccaaggcgctggaaacaccgggcggtttgaagatccagacaatccacgcc
ttctgcgaggcgttgctgcaccaatttccgctggaagccaatgtcgccggccatttctcc
gttctcgacgaccgcgccgcaaccacgctgctggctgaggcgcgccgttcgctcctgacc
gcggtttcgacggaaagcgatgcggacttggcgcaggcgctggcctatgttctcgatctc
gccgatgaaagcgggttggaagcgctgctttccgccatcatcgccaatcgcagtgccctg
cgggccttccttctggatgccaaacagtcaggcggcatcgatgcccggttgcggcaggcg
atgcagattgcagatggagagaccgaagaaactgccgcggccgctttctggcctctcccc
ggcctctccggcctcgcgctcgatacgtatctcacccttgccgacgaggtgggtggatca
cgcgtcatcgatgtcgcctatgcactcagggaagcaaaacgacaaccagaccccgtgcgg
cggatggaattcatcgaagccgccctgctgacggccaagggtgaaaagaaatcggatgcc
tatgtcatcaacaagggcatgcagaaatccgcccccgaacttctcgatgcgctgacactg
gcgcgggaccatgtcgtttcctgccgcaaccgttatcgtctggtgcgaatgctggcggcg
accaaatgcgcccttgttctggcggaaaggctgatcggtgatttcgaagacctgaagaaa
cagcgaagccagctcgatttcgaagacctgatcgagcgcgcggccaacctcctcaaccgc
gatacggcgggtgcatgggtgcattacaagctggatcagggcatcgaccatattctggtc
gatgaggcgcaggacacgagcccggtgcaatggtcgatcatccagtcgcttgcggcggat
ttcttcaccggcgagagcgcccgcatggggcggcgtacgctgtttgccgtgggcgatgaa
aaacagtcgatctattcattccagggcgcgcggccggaacggttttcgcaggagcgcgaa
gagaccaagagacgggtcgattcggtcgaacaggcctttcaccgcattcgcctgccgcta
tccttccgatccacggaggatgtgctggcggctgtcgaccaggtgttttcggacccgaat
aacgcaagcggcctcagtgccgataacgagccggtggagcaccggtccaaccgcgctggc
catcccggcaccgtggaagtgtgggatatggtggcaccggaaaccaccgaggacgaagag
gattggacagcccccttcgatgcgctgcgggaaagcgcgccggccaccataattgcccgc
cggatcgccgcgcgcatcgccgatatgatcggacgcgagaccatcatcgaaaaaggcgtg
gagcgcgccatcgaaccgggcgacattctggtgctcgtcagaaaacgtcatgccttcgtc
aatgcactgacccgggagctgaaacggcgcaagaacatacccgttgccggcgctgaccgc
cttcgtttgaccgaccacattgccgtgcaggaccttctggcgctcggtcatttcgttgtc
ctgcccgaagacgacctttcccttgccgcacttttgaaaagtccactcttcaacctgacg
gaagacgacgttttcgacattgctgccatgcgatcggaaacggagagcgtctggaaacgg
ctgcaaatccttgcgcaggaagataatagccatctttccagcgttaccgccaagctggaa
ggttttatcgcgctttctaaaacggccaccgtacacgatttcttcgcagcggtgcttaca
ctgcatgacggacgcaaaaaatttctcggcagacttggcaacgaggcaagcgacgttctg
gatgaattcctgtcctttgcgctggatcacgaaaggaccggcctgcccggcctgcaggcc
tttctctccgttctgggaactgactcaccggaggtgaagcgggagcaggataaggatcgc
ggcgaagtgcgcatcatgaccgtgcacgcctccaaagggttggaagcaccggtcgttttt
gtcgtcgatggaggttcgaaggccttcaatcacagccatgtgcctaaactgcgttttgtc
gaagcgggtgaagacgccttcccggtctggttgcccggcagcggattttcaaaccacctt
atccgatcggatgaagagcggctgaagaccgccgcagaagatgaatatcggcggctgctt
tatgtggccatgacgcgcgccgccgatcacctcgtcgtctgcggttatcgcggccagaag
gaaaatcccgaatgctggcatgccatcgtcaaaaaggcgcttgccaacaacgaagaccat
tgcaagccccagcttttcacggcggatggtgaggaatggcaggggcttgtctggcgcaaa
tccgaaccgcgctcgacacctgtcccacaaaggccgtcggaaacgccgcagcaggaagac
tatgcccttccagcgggacttcttacccctttgccggtcctgccctctctaccgagacca
ctcagcccttccggcgcgggcaccatcatcgatgacggtgcggatgatctcgccgtgcgc
tcaccactgttcggggagaaagccgaggtctcttcattggcgctgcagcgcggacggttg
gtgcatcgcatgcttcaggcgctgcccgattttccggaggtcgaacgggaagaggcggcg
cgccgttatgctgaacgcgcggcgcggttctggcctgttaccgagcgcgagcaattggta
cgggccgttttgcgtgtcatgtccgaacccgctgtgcagccggccttctctgccaacagt
cgcgcggaagtgtcgatcatgggtacgatggccctcggccggcagcaatatgcagtctcc
ggccgcatcgaccggctggcggtcgaaggagatcgcgtcatcctgatcgattacaagact
aaccgagtgccgcctcgtgaagcgcgtgaaattcccttctcccatacggcgcagctcgcc
atttatcgtgaaattctggcacctctttatcccggcaaggaatttgtctgtgcgctgatt
tatacggaaaatgctgcctttataacggttggcgacgatgcgatgagagaggcccttgcc
gcaataaagacaaagtga
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