Rhizobium sp. Y9: BLX90_12090
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Entry
BLX90_12090 CDS
T11041
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rhiy Rhizobium sp. Y9
Pathway
rhiy03030
DNA replication
rhiy03430
Mismatch repair
rhiy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLX90_12090
03430 Mismatch repair
BLX90_12090
03440 Homologous recombination
BLX90_12090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhiy03032
]
BLX90_12090
03400 DNA repair and recombination proteins [BR:
rhiy03400
]
BLX90_12090
Enzymes [BR:
rhiy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BLX90_12090
DNA replication proteins [BR:
rhiy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BLX90_12090
DNA repair and recombination proteins [BR:
rhiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BLX90_12090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
AAA_30
AAA_5
AAA_14
RuvB_N
AAA_19
AAA_18
AAA_assoc_2
AAA_24
TsaE
SRP54
DUF815
SKI
ABC_tran
VapE-like_dom
RNA_helicase
AAA_2
CbiA
AAA_33
Rad17
nSTAND3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AUC10878
LinkDB
All DBs
Position
1:complement(2531882..2533756)
Genome browser
AA seq
624 aa
AA seq
DB search
MNDSVPTTSSESQVGTGYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYMLT
GVRGVGKTTTARILARALNYKTDTIDKPTIDLRIPGEHCQAIMEGRHVDVIEMDAASHTG
IDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIR
KVPITVLSRCQRFDLRRISAADLVGLFTAIAGKEGFEAEPQALSMIARAAEGSARDGLSL
LDQAIAHGGGRVEAEAVRGMLGLADRARIVDLFQHVVKGDVAAALSEFNGQYEAGANPVV
VLNDLADFTHLVTRMKYVPDAAEDPSLSEIERVRGAEFADTIAVTALSRIWQMLLKGIPE
TENASRPAGAAEMVLIRLAHAANLPAPEDAARRLLELSNGDGGYANGGPSGGGNGGGARA
YSSAQTVAAGRPVDLPTQRQATPQTSAILRAIPDSRPQEMQVAAPKTEERPEPKVPVNSV
QDIADLCQKNRDPVMRAKVRNFVRLVRLEPGRLDMRLGEGAPGSLPGELGVKLKEWTGIH
WIISLSKEQGEPTLVEAEGNARDARLVDARQDPDVAAILAQFPGAKITDVRIRAAVQDEA
EDIASPSVAESSEGDILPGDDIEF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacagcgtacccaccacatcaagcgaatcccaggtcgggaccggctatcgggta
ctggcgcgcaaatatcgcccgaaggatttttccgatctgatggtcggacaggagccgatg
gtccgcacgctgacaaacgcgttcgagaccggacgtattgcgcaggcctatatgctgacc
ggcgtccgcggcgtgggcaaaacgaccacggcccgcattctcgcccgagcgctgaattac
aaaaccgacaccatcgacaagccgaccatcgatctgcgcattcccggtgaacattgtcag
gcgatcatggaaggtcgccatgtcgacgtgatcgagatggatgccgcctcccataccggc
atcgacgatattcgcgaaatcatcgaacaggtgcgttatcgccctgtctcggcgcgttat
aaggtctatatcatcgacgaagtgcacatgctgtcgacgcaggctttcaacggcctgctc
aagacgctggaagagccgccggagcatgtgaagttcatcttcgccacaacggaaatccgc
aaggttcccatcacggttctgtcacgatgccagcgtttcgacctgcgccgcatcagcgcc
gccgatctcgtcggcctttttaccgccatcgccggcaaggaaggtttcgaagccgaaccg
caggcgctttcgatgatcgcccgcgcggcggaagggtctgcccgtgacggcctgtcgctg
ctcgatcaggcaatcgcccatggtggtggccgggtggaagctgaagcggtacgcggcatg
ctcggtcttgccgaccgggcccgcatcgtcgatctcttccagcatgtcgtcaaaggcgat
gtcgcggccgctctgtcggaattcaacggtcaatatgaggcgggcgcgaacccggttgtg
gtccttaacgatctcgccgatttcacccatctcgtgacccgcatgaaatatgtgccggat
gcagcggaagatccctcgctttctgaaatagaacgcgtgcgcggtgcggaatttgccgac
acgattgcggtcaccgcgctttcgcgcatctggcagatgttgctgaagggcataccggaa
acggaaaacgcctcgcgcccggccggtgctgccgaaatggttctcatccggctggcgcac
gctgccaatcttcccgcacccgaagatgctgcccggcgcttgctggagctttcgaacggt
gacgggggttacgccaatggcggaccttccggcggcggcaatggcggcggtgcgcgcgcc
tattcgtcagcacagaccgtggccgcgggacgacctgtcgatcttcccacccagcgccag
gcaacaccacagacctccgccatactgcgcgccattccagatagccgcccgcaggagatg
caggtcgcagcaccgaaaacggaggagcggccggagccgaaagttcccgtcaattccgtg
caggatattgccgatctgtgtcagaagaaccgcgatcccgtcatgcgggcgaaagtgcgc
aacttcgtacggctcgtacggctggagcccggccggctcgatatgcgcctcggggaaggt
gcccccggctccctgcccggcgaacttggcgtcaagctcaaggaatggactggcatccac
tggatcatcagcctcagcaaggagcagggggaaccgacccttgtcgaggctgagggcaac
gcacgggacgcgcgtcttgtcgatgcacgccaggaccctgatgtggctgccatcctggcg
cagtttcccggcgcaaaaattaccgacgtgcgcatccgcgccgccgtacaggatgaggct
gaagacatcgcgtcgccatcggttgccgaatcgagtgaaggcgacatccttcccggcgac
gacatcgagttttaa
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