Rhizobium sp. Y9: BLX90_12155
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Entry
BLX90_12155 CDS
T11041
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhiy Rhizobium sp. Y9
Pathway
rhiy03030
DNA replication
rhiy03410
Base excision repair
rhiy03420
Nucleotide excision repair
rhiy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLX90_12155
03410 Base excision repair
BLX90_12155
03420 Nucleotide excision repair
BLX90_12155
03440 Homologous recombination
BLX90_12155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhiy03032
]
BLX90_12155
03400 DNA repair and recombination proteins [BR:
rhiy03400
]
BLX90_12155
Enzymes [BR:
rhiy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BLX90_12155
DNA replication proteins [BR:
rhiy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BLX90_12155
DNA repair and recombination proteins [BR:
rhiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BLX90_12155
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLX90_12155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
WHD_BrxR
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
AUC10889
LinkDB
All DBs
Position
1:2545239..2548235
Genome browser
AA seq
998 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVT
PTHFAVIFDYSSKTFRNELYDLYKANRTAPPEDLVPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEAIGADVTIISSDKDLMQLVTANVHMYDAMKDKQIGIPDVIEKWGVGPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIKQQKRRENIIANA
ELARISRQLVALRTDVPLDQPLEALVLEPQNGPKLIAFLKAMEFTTLTRRVAEATETDAS
AIESANVPVQWGADAHGPDLDATAAPAVGEAAAGVTGTAVSPAIPARKGAGEGSAPADLA
TARQTLFAAAKIDTSAYTTIRDLATLDLWVAAARETGVVAFDTETTSLDPMQAELVGFSL
AIADNGKDASGSDIRAAYIPLTHKTGSGGDLFSDGIRLAEGQVPFDEALVRLKDLLEDEA
VLKVAQNLKYDYLLMKRHGVVMQSFDDTMLISYVLEAGKATHGMDSLSERWLGHTPIPYK
DVAGSGKSSVTFDFVDIDKATAYAAEDADVTLRLWMALKPRLVSERLTKVYERLERPLVP
VLAHMEERGITVDRQILSRLSGELAQKAAAFEEEIYELAGERFNIGSPKQLGDILFGKMG
LPGGSKTKTGQWSTSAQVLEDLAAEGIELPRKIVDWRQLTKLKSTYTDALPGYIHPETKR
VHTSYALASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLLSADYSQIELRVL
AHVADIPQLRNAFENGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLA
NQLGIARSEAGEYIKKYFERFPGIRDYMEATKAFARENGYVETIFGRRAHYPEIRSSNPS
VKAFNERAAINAPIQGSAADIIRRAMVRIEPALEAENLSARMLLQVHDELIFEVDEAEIE
KTLPVVVSVMENAAMPAISMKVPLQVDARAADNWDEAH
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctcgttgacgggtccggtttcattttccgggccttc
catgccatcccgccgctgaaccgcaagtcggacgggctgccggtcaacgccgtttccggc
ttctgcaacatgttgtggaagctcctgaaggatgcgcgcaacaccgatgtcggcgtgacg
cccacgcattttgcggtaattttcgattattcatcaaagacattccgcaatgagctttat
gatctctataaagccaatcgcacggcgccgccggaagatctggtgccgcaattcgggctg
atacgggaggcgacgcgcgccttcaaccttccctgcatcgagacggaaggcttcgaggcg
gacgatatcatcgccacctatgcccggcaggcggaggccattggggccgatgtcaccatc
atctcctccgacaaggatctgatgcagctcgtcactgccaatgtccacatgtacgatgcg
atgaaggacaagcagatcggcatccctgatgtcatagagaaatggggcgtgggtcccgaa
aagatgatcgacctgcaggcgatgaccggcgattcgaccgacaatgttccgggcatcccc
ggcatcggtccaaagacggccgcgcaattgctggaagaatacggcgatctcgatacgctg
ctcgcccgtgcaggtgagatcaagcagcagaagcgtcgggaaaatatcatcgccaatgcg
gaacttgctcgtatttccagacagctcgtggcactgaggaccgacgtgccgctggatcag
ccgcttgaagcactggtgctggaacctcagaacggcccgaaactcattgccttcctgaag
gcgatggaattcaccacgctgacgcggcgggttgccgaagcgacagagaccgatgcttcc
gccattgagtccgccaatgtgccggttcagtggggcgctgacgcccatggtcccgatctc
gatgcgacggccgctccggctgtgggcgaagcggctgctggcgtaacgggcactgcggtt
tcgcccgctattccggcgcggaaaggtgccggggagggcagcgcgccggctgatcttgcc
accgcccgccagacgctttttgccgccgccaagatcgacacgagcgcctacacgacgatc
agggatcttgcgacgctggacctctgggttgcggcggcgcgggaaacgggggtcgtcgcc
ttcgatacggaaacgacatcgcttgatccgatgcaggcggaactcgtcgggttttcgctg
gcaatcgccgataatggcaaggatgcctcgggcagcgatatacgcgccgcctacattccc
ttgacgcacaagactggctccggcggcgatctattcagcgatggtatcaggctcgccgaa
ggccaggtgccctttgacgaagcactggtccgtctcaaggacttgcttgaagacgaggcc
gtgctgaaggtcgcgcaaaatctcaaatatgactatctgctcatgaaacgccatggcgtc
gtcatgcagagtttcgacgatacgatgctgatctcctatgtgcttgaggctggcaaagcg
acgcacggcatggattcgctgtccgaacgttggctcggccatacgccgatcccctataag
gacgtggcgggatcgggcaagtcgagcgttaccttcgattttgtcgacatcgacaaggcg
acggcatatgcagcggaggacgctgacgtcaccttgcggctgtggatggcgctgaagccg
cggcttgtttcagaacggctgaccaaggtttacgagcggctggaacgtccgcttgtgcct
gttctggcgcatatggaggagcgtggcatcaccgtcgaccggcaaatcctctcacgtctt
tccggcgaactcgcccagaaggcggcagcgtttgaagaggaaatctacgagctggccggc
gagcgtttcaacatcggctcgccaaagcagctcggcgacatcctgttcggcaagatgggc
ctgccgggcggctccaagaccaagaccggccaatggtcgacttcggcacaggtgctggag
gatttggcggctgaaggtattgaactgccccgcaagatcgtcgactggcggcagctgacg
aagctgaaatccacctatacggatgcactgccgggatatatccacccggagacgaaacgt
gtgcatacatcctatgcgctggcctccaccacaacaggccgtctgtcgtcctcggaaccg
aaccttcagaacatccccgtccgcacggcggaagggcgaaaaatccgcacggctttcatc
tcgacgcccggccacaagcttctttccgccgactacagccagatcgaactgcgcgtgctg
gcccatgtcgccgatattccgcagcttcgcaacgccttcgaaaacggcatcgacattcat
gccatgacggcttcggaaatgtttggtgtgcctgtcgaaggcatgccctcggaagtgcgc
cgccgcgccaaggccatcaatttcggcattatctacggtatttcggctttcggtctcgcc
aaccagctcggtatcgcccggtctgaagccggcgaatatatcaagaaatatttcgagcgt
tttcccggcatccgcgactacatggaggcgacaaaggctttcgcccgtgagaacggttat
gtcgagacgattttcggccgccgcgcccattatccggaaatccgctcgtccaacccttcc
gtgaaagccttcaacgagcgcgccgccattaacgcgccgatccagggctccgcggcggat
atcatacggcgcgccatggtccgtatcgaaccggcgctggaggctgaaaacctgtccgcc
cgcatgctgttgcaggtgcatgacgaactcatcttcgaggtcgatgaagcggaaatcgag
aaaactctgcccgtcgtcgtctctgtcatggaaaatgcggccatgccggcaatctccatg
aaggtgccattgcaggtggatgcccgcgcggctgacaactgggacgaggcgcattga
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