Rhizobium sp. Y9: BLX90_12895
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Entry
BLX90_12895 CDS
T11041
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rhiy Rhizobium sp. Y9
Pathway
rhiy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BLX90_12895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhiy03400
]
BLX90_12895
Enzymes [BR:
rhiy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BLX90_12895
DNA repair and recombination proteins [BR:
rhiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BLX90_12895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AUC11013
LinkDB
All DBs
Position
1:2694226..2695824
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AA seq
532 aa
AA seq
DB search
MSDIFSHAALSNLAEFSVSELSGSIKRTVETAFEQVRVRGEISGYRGPHSSGHAYFSLKD
DRARIDAVIWKGTFSRLKFRPEEGMEVIATGKITTFPGSSKYQIVIENLEPAGAGALMAL
LEDRRRRLAAEGLFDPARKRRLPFMPRVIGVVTSPTGAVIRDILHRISDRFPVHVVVWPV
KVQGEGSGEEVANAIRGFNALQPGGEIARPDVMIVARGGGSLEDLWSFNDEIVVRAAAES
EIPLISAVGHETDTTLIDYAADVRAPTPTGAAEMAVPVRAELEAQLSGLAARLSGSVLRQ
MDNRRQGVRALVRALPSLDQLLALPRRRFDEAASGLGRGLEITALNKRRAFERSASGLRP
ETLLNGLKHHRQRITERMHRAETLVERRLLQGQGRVDAFDSALRSLPARLLGQLERQKER
VVTASRRADTAVLHRMAQNRSGLAAHDRILQSLSYKNVLNRGYAVIRDDENRPLTRAAAI
ASGAVVSMEFADGRVSAITTGEGTPSPDTPVALKKKPVKPASSDPGNQGSLF
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatcttctcccacgccgcattgagcaatcttgccgaattctcggtctccgaa
ctgtcgggctccatcaaacgcacggtggagacggcgttcgaacaggtgcgggtgcggggc
gaaatttctggttatcgtgggccgcattcgtcaggacacgcctatttctcactgaaggat
gatcgtgcccgcatcgatgcggtgatctggaagggcaccttctcgcggctgaaattccgc
ccggaagagggcatggaagtcatcgccaccggcaagatcaccacctttcccggttcctcg
aaataccagatcgtcatcgaaaaccttgagcccgccggcgccggcgcgctgatggcgctt
ttggaggatcgccgccggcggctggcggcggaagggctgttcgatccggcccgcaagcgc
cgcctgcctttcatgccgcgcgtcattggggttgtgacctcgccgacgggcgcggtcatc
cgcgatattctccaccgcatttcggatcgtttcccggtccatgtcgtcgtctggccggtc
aaagtgcagggcgaaggctcgggtgaggaggtggcgaacgccattcgcggcttcaacgcg
cttcagcccggcggcgagattgcccgccccgatgtaatgatcgttgcgcgcggcggcggc
agcctcgaagacctctggagcttcaatgacgaaatcgtcgtgcgcgccgctgccgagagc
gaaatcccgctgatttccgccgtcggacacgagaccgatacgacattgatcgattatgcc
gccgacgtgcgcgccccgacgccgacgggagccgccgaaatggcggtgccggtgcgggcg
gaactcgaagcgcagctgtcgggcctcgctgcccgcctttccggttcggtcttgcggcag
atggacaatcgccgtcaaggtgtgcgtgcgctggtgcgcgcgctgccttcgcttgatcag
cttcttgctttgccgcgccgccggttcgacgaagccgcgagcggtctcggtcgcggattg
gaaataacagccctcaacaagcgccgtgccttcgaacgttctgcctcgggtctcaggccg
gaaaccctgttgaacggtctcaaacaccacaggcagcggatcaccgaacgcatgcaccgg
gccgagaccctggtggaacgccgcctgttgcaggggcagggccgcgttgatgctttcgat
tccgcgttgcgttcgctccccgcccgacttctcggccaactggagcggcagaaggaacgc
gtcgtcaccgcgtctcgtcgcgccgataccgccgtgttgcatcgcatggcgcagaaccgt
tccggtctcgccgcccatgatcgtatcctgcaatcgctgtcctataagaacgtgctgaat
cgcggttatgcggtgatccgcgatgatgagaaccggccgctgactcgcgcggcggctatc
gcgtcaggcgctgttgtctctatggaatttgctgacggtcgcgtctccgccatcacaacg
ggagaggggacgccgtccccggatacgcccgtcgcgttgaaaaagaagccggtcaaaccg
gcttcttcggaccctggcaaccagggcagcctgttctga
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