Rhizobium sp. Y9: BLX90_16210
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Entry
BLX90_16210 CDS
T11041
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rhiy Rhizobium sp. Y9
Pathway
rhiy00300
Lysine biosynthesis
rhiy00470
D-Amino acid metabolism
rhiy01100
Metabolic pathways
rhiy01110
Biosynthesis of secondary metabolites
rhiy01120
Microbial metabolism in diverse environments
rhiy01230
Biosynthesis of amino acids
Module
rhiy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhiy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BLX90_16210
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BLX90_16210
Enzymes [BR:
rhiy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BLX90_16210
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AUC11864
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All DBs
Position
2:681109..682377
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AA seq
422 aa
AA seq
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MNHFGYIDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYKVFSGAFADVDAMVCYAMK
ANSNQAVLKTLAKLGAGIDVVSGGELRRALAAGVPANRIMFSGVGKTVAEMDYALDVGIY
CFNIESEPELEVLNLRAIKAGKRAHVSFRINPDVDARTHAKISTGKKENKFGISYERARA
VYAHAATLPGIEVTGIDMHIGSQITELQPFEDAFRLLRELVEALRGDGHAISHVDIGGGL
GIPYRDDNNPPPLPDAYAHIVKNELKSLDCKIVTEPGRLIVGNAGILVTEVIYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHGIRPVVQPAEDTPRIKADIVGPVCETGDYLALDREMAA
PQPGDLIAVSSAGAYGAVQAGTYNSRLLVPEVLVKGDKFHVIRPRGTYEELIALDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccattttggctatatcgacggcgtgctgcacgccgaaaacgtgcccgtgcccgag
atcgccaaggcggtcggcacgcccttctacgtctattcgaccgcaaccctggagcgccac
tacaaggtgttctcaggtgcgtttgcggatgtggacgccatggtctgttatgccatgaag
gccaactccaaccaggccgtgctgaagacgctggcaaagctcggcgctggcatcgacgtc
gtctccggcggtgaattgcgtcgcgctctggctgctggcgtgccggcaaaccgcatcatg
ttctccggcgtcggcaagacggttgcggaaatggattatgcgctggatgtgggcatttat
tgtttcaacatcgaatccgagccggagctggaagtcctcaatctgcgcgccatcaaggcg
ggcaagcgggcgcatgtctccttccgcatcaaccctgatgtggatgcgcgcacccacgcc
aagatttccaccggcaagaaagaaaacaagttcggcatttcctatgagcgggcgcgcgcc
gtctatgcccatgctgcaaccctgcccggcatcgaagtcacgggcatcgacatgcatatc
ggcagccagatcaccgagttgcagcctttcgaagacgccttccggctgctgcgcgaactg
gtggaagcgcttcgcggcgatggccatgcgatcagccacgtcgatatcggcggcggcctc
ggcattccctaccgcgacgacaataatccgccgcctttgccggatgcctatgcgcatatc
gtcaagaacgagttgaagagcctcgactgcaagatcgtcaccgagcccggccgcctgatc
gtcggtaatgccggcattctggtaacggaagtcatctatgtgaaggatggcggcgaaaag
acctttgtaatcgttgacggcgcgatgaacgacctcatccgtccgacactgtatgaggcc
tatcacggcatccgcccggtggtgcaaccggcagaggatacgccgcgcatcaaggccgat
atcgtcggcccggtctgcgaaaccggcgactatctggcgctggaccgtgagatggccgca
ccgcaaccgggcgacctcatcgccgtcagttccgctggcgcctatggtgcggtgcaggca
ggaacctataattcccgcctgctggtgccggaagtgctggtcaagggtgacaaattccac
gtcatccgcccccgcggcacgtatgaagagctgatcgccctcgattccgtgcccgcctgg
ctcgactga
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