Rhizobium sp. Y9: BLX90_21420
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Entry
BLX90_21420 CDS
T11041
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhiy Rhizobium sp. Y9
Pathway
rhiy03420
Nucleotide excision repair
rhiy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BLX90_21420
03430 Mismatch repair
BLX90_21420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhiy03400
]
BLX90_21420
Enzymes [BR:
rhiy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLX90_21420
DNA repair and recombination proteins [BR:
rhiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLX90_21420
MMR (mismatch excision repair)
Other MMR factors
BLX90_21420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
HHH_5
AAA_12
HHH
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AUC12804
LinkDB
All DBs
Position
2:complement(1854908..1856974)
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AA seq
688 aa
AA seq
DB search
MAVAYLEKLNEQQRKAVEHGVGLVDGHVAGPLLIIAGAGSGKTNTLAHRVAHLIVNGADP
RRILLMTFSRRAASEMARRVERICKQVHGANSAIMTDALAWSGTFHGIGARLLRIYAEQI
GLNIDFTIHDREDSADLMNLARHELGFSKTESRFPTKGTCLAIYSRVVNSQTPLKDILRQ
HYPWVANWESELRELFAAYVEAKQVQNVLDYDDLLLYWAQMVSDPVLADDIGNRFDHVMV
DEYQDTNRLQASVLMALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPASFSPAADIIT
LDRNYRSTQPILAAANGVIDLARERFTKNLWTERQSLERPKLVTVKDETEQANFIIDQIL
ANRESGMTLKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMMAVLRFA
QNPRDRVAGFRLLQMLPGIGPKKAGNILDAIATDPEPLLTLAEIPPPPKTGDDWTAFTQM
LVGLRQAPNDWPGQIGQARQWYEPHLERLHEDADTRKADLLQLEQIAGGYPSRERFLTEL
TLDPPDATSDQAGVPLLDEDYLSLSTIHSAKGQEWRSVFILNVVDGCIPSDLGVGTTQEL
EEERRLLYVAMTRAKDSLSLITPQRFFTGGQSQQGDRHVYAARTRFIPATLLQFFETMTW
PLVSAAASERSAQQIRIDVGARMRAMWK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcctatctggaaaaactgaacgagcagcaacgcaaggccgtggagcatggt
gttggactggtggatggacatgtcgccggtccgcttctgatcatcgccggcgccggttcg
ggaaagaccaatacgctggctcaccgtgttgcgcatctgatcgtgaatggcgccgatccc
cgccgcatcctgctgatgacgttctcaaggcgagcagcctccgaaatggcgcgccgtgtc
gaacggatatgcaagcaggtccacggggcaaattcggcaatcatgacagatgcattggcg
tggtccggcacgtttcacggcattggtgcacggctgttgcgcatctatgccgagcagatc
ggcctcaacatcgatttcaccatccacgaccgcgaagacagcgccgacctgatgaatctt
gcccggcacgagctgggtttttccaaaaccgaaagccgctttccgacaaaaggcacctgt
cttgcgatctattcgcgcgtcgtgaattcccagacaccactcaaggacatcttgcgccag
cattatccatgggttgccaactgggaaagcgaactcagggaattgtttgcggcctatgtt
gaggcgaagcaggtccagaacgtgctcgattacgacgatcttctgctctactgggcccag
atggtcagcgaccctgttctggctgacgatataggcaaccgcttcgaccatgtgatggtc
gatgaatatcaggataccaaccggttgcaggcatcggtgctgatggcgctgaagcccggt
ggccgcgggttgaccgtggtgggtgacgatgcgcagtcgatttattctttccgtgcggcg
acggtgcgaaacatcctcgattttccggcttccttcagcccggcggccgatatcatcacg
ctggatcgcaactatcgctcgacgcagccgatccttgcggctgccaacggcgtcattgat
ctcgcgcgagagcggttcaccaagaatctctggaccgagcggcagtcgctggagcgcccg
aaactcgtgacggtgaaggatgaaaccgagcaggcgaacttcatcatcgaccagatcctc
gccaatcgcgagagcggcatgacactgaaacagcaggccgtgctgttccgcacctccagc
catagcggcccgctcgaggtggaactgacccgccgcaacatccccttcgtcaaattcggc
ggcctgaaattcctggacagcgcccatgtgaaggacatgatggccgtgctgcgtttcgcc
cagaacccgcgcgaccgcgtcgccggtttccggctgctgcagatgctgccaggcatcgga
ccgaagaaggctggcaatattctcgatgcgattgcgacagacccagagccgctgcttacc
ctcgccgaaattccgccgccgccgaagaccggcgatgactggacagccttcacacaaatg
ctcgtgggcctgcggcaggcgccgaatgactggccgggccagatcgggcaggctcggcag
tggtacgagccgcatctcgaacgcctgcatgaggatgcggacacccgcaaggccgatctg
ctgcaactcgagcagatcgccggcggctacccatcgcgcgagcgctttctgactgaactg
acgctcgatccgccggacgccaccagcgatcaggccggcgtgccgctgcttgacgaggat
tatctcagcctctcgaccatccattccgccaaaggtcaagagtggcgctccgtcttcatc
ctcaatgtggtcgacggctgcatcccctccgacctcggcgtcggcaccacccaggaactg
gaggaggaacgccggctgctctacgtcgccatgacccgcgccaaggacagcctgtcgctg
atcaccccgcaacgtttcttcaccggcgggcagagtcagcagggtgaccggcatgtttac
gccgccagaacccgcttcataccggcaaccttgctgcagttttttgagacgatgacttgg
ccactggtttcagccgccgcttcggaacgcagtgcgcagcagatccgcatcgatgtgggt
gcgcggatgagggcgatgtggaagtag
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