Rhizobium sp. Y9: BLX90_21520
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Entry
BLX90_21520 CDS
T11041
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rhiy Rhizobium sp. Y9
Pathway
rhiy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rhiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BLX90_21520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhiy03400
]
BLX90_21520
DNA repair and recombination proteins [BR:
rhiy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BLX90_21520
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
FERM_M
DUF5788
Motif
Other DBs
NCBI-ProteinID:
AUC12824
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All DBs
Position
2:1877701..1878528
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AA seq
275 aa
AA seq
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MNRRASWKGHLVFGDLNCEIGLYSALTSSEKISFNIVNRKTGHRVERQYVDSDTGEAVER
DEQVKGYERDNGDYIVIEGDEISKLMPENDKVIRIRHFLQCDDIDKLYFDKSYYLAPTQE
GGEEALTLLARAMEDENVAALGEAVMFRRNRVVLIRPSGRALVATTLNFGYEVRAENTVF
KSIPDIEFDDEMLELAGHIIETRAGTFDPSDYSDRYNDALAELVKAKIEGREIRKRVPQK
HDNVIDLKEALRRSAKEDAGKKAKPPGRKTSRKAS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggagggcgagctggaaaggccatctggtctttggtgatttgaattgtgaaatc
ggtctttattccgcgctgacctcgtcggagaaaatctcgttcaacatcgtcaaccgcaag
acgggtcaccgcgtagagcggcaatatgtggatagtgataccggcgaggcggtcgaacgg
gacgagcaggtcaagggctacgaacgcgataatggtgattacatcgtcatcgagggtgac
gaaatctcaaagctgatgccggaaaatgacaaggttatccgtatccggcacttcctccag
tgcgacgacatagacaagctttatttcgacaaatcctattatctagcgcccacacaggaa
ggtggcgaggaggcgctgacgcttcttgccagagcgatggaagacgaaaatgttgctgct
cttggagaggccgtgatgtttcgtcgcaaccgcgtggtcctcatccgcccgagcggcagg
gcgctcgtcgcaactacgctgaacttcggttacgaggtgcgggcagagaacaccgtcttc
aaatccatcccggacatcgagttcgatgacgaaatgctggaacttgccggtcatatcatc
gaaacgcgggccggcaccttcgatccctccgattatagcgaccgttacaacgatgccctt
gcggagttggtgaaagccaagattgaaggccgggaaatccgcaagcgggtgccgcagaaa
catgacaatgtgattgatctcaaggaggcgcttcgtcgcagcgcaaaggaagacgccgga
aaaaaagcgaagccgccaggccgcaagacgtcacggaaagcgagctga
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