Rhizobium sp. Y9: BLX90_23520
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Entry
BLX90_23520 CDS
T11041
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhiy Rhizobium sp. Y9
Pathway
rhiy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhiy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLX90_23520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhiy03019
]
BLX90_23520
03110 Chaperones and folding catalysts [BR:
rhiy03110
]
BLX90_23520
03029 Mitochondrial biogenesis [BR:
rhiy03029
]
BLX90_23520
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhiy04147
]
BLX90_23520
Enzymes [BR:
rhiy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BLX90_23520
Messenger RNA biogenesis [BR:
rhiy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BLX90_23520
Chaperones and folding catalysts [BR:
rhiy03110
]
Heat shock proteins
HSP60 / Chaperonin
BLX90_23520
Mitochondrial biogenesis [BR:
rhiy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BLX90_23520
Exosome [BR:
rhiy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BLX90_23520
Exosomal proteins of other body fluids (saliva and urine)
BLX90_23520
Exosomal proteins of breast cancer cells
BLX90_23520
Exosomal proteins of colorectal cancer cells
BLX90_23520
Exosomal proteins of bladder cancer cells
BLX90_23520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
AUC13321
LinkDB
All DBs
Position
pY9:complement(182735..184360)
Genome browser
AA seq
541 aa
AA seq
DB search
MSAKQIIFGRDAREKLLRGVDILADAVKVTLGPKGRNVVIDKSYGAPRITKDGVTVAKEI
ELDDKLENMGAQMVREVASKTNDVAGDGTTTATVLAQAIVREGGKAVAAGMNPMDLKRGI
DLAVAAVVKDLLAKAKKINTSEEVAQVGTISANGEKEIGQYIADAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNAEKMVAELEDAYVLLHEKKLSNLQAMLPILEAV
VQSGKPLLIISEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDLAILTGGTV
ISEDLGIKLETVTLEMLGRAKKISITKEATTVVDGAGTKADIDGRVAQIKAQIDETSSDY
DKEKLQERLAKLSGGVAVIRVGGSTEIEVKEKKDRIDDALNATRAAVEEGIVPGGGTALL
RASIILDIKGENDDQNAGIAIIRKALQSLVRQIAENAGDEGSIVVGRILESDTDNFGYNA
QTSEYGDMIAMGIVDPVKVVRTALQNAASVAGLLVTTEAMIADLPRKVAAGGGMPDMGGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaaacaaatcatattcggccgtgatgcacgcgaaaagctgctgcgaggcgtc
gacattctcgccgacgctgtgaaagtcacactgggacccaagggccgtaacgtggtgatc
gataagtcctacggtgcgccgcgcattaccaaagacggcgttaccgtcgccaaggaaatc
gaactcgacgacaagctcgagaacatgggcgcccagatggtgcgcgaagttgcatcaaag
accaacgatgtcgcaggcgacggtacgaccactgcaacggttcttgcccaagccatcgtt
cgcgaaggtggcaaggcagttgcggccggcatgaacccgatggacctaaagcgtggtatc
gaccttgccgtcgcagccgtcgtcaaggacctgctggccaaggccaagaagatcaatacg
tcggaggaggtcgctcaggttggcactatctcggcgaatggagaaaaggaaatcggtcaa
tatatcgccgatgccatgcaaaaggtcggcaatgaaggtgtgatcaccgtcgaagaagcc
aaaaccgctgaaaccgaactcgaggtcgtcgaaggcatgcagttcgaccgcggctatctg
tcaccctatttcgtcaccaatgccgaaaagatggtcgctgaactggaagatgcctatgtg
ctgctgcacgagaagaagctttccaatctccaggcgatgctgccgatcctcgaagccgtc
gtgcagagcggcaaaccgctcctgattatctccgaggatgtcgagggcgaggctctcgca
acgcttgttgtcaacaaactgcgtggcggcctgaagatcgctgccgttaaggctccgggc
ttcggtgatcgtcgcaaggcgatgctcgaagatctcgccatcctgaccggcggcacggtc
atctccgaagacctcggcatcaaattggaaaccgtcactcttgaaatgctcggccgcgcc
aagaagatctcgatcaccaaggaagcgaccaccgtcgtcgatggtgcgggcacgaaggcg
gatatcgacggtcgcgttgcccagatcaaggcccaaatcgacgaaacttcgtcggactac
gataaggaaaagctgcaggagcgactcgccaagctttccggcggtgtcgccgtaattcgc
gtcggcggctcgacggaaatcgaggttaaggagaagaaggatcgcatcgacgacgcgctc
aacgcaacccgcgctgctgtcgaagaaggtatcgttcccggcggtggcacggctctgctc
cgcgcctcgatcatcctcgatatcaagggcgagaacgacgatcagaatgccggcatcgcc
atcatccgcaaggccctgcagtctctggttcgccagattgccgaaaatgccggtgacgaa
ggctcgatcgtggtcggccggattctggaaagtgacaccgacaatttcggttacaatgct
cagacatccgagtacggcgacatgatcgccatgggtatcgttgatccggtcaaagtggtt
cgcaccgccctacagaatgctgcttcggtggcaggtcttttggtgacaacagaagccatg
attgccgacctccccaggaaggttgctgccggcggcggcatgcctgacatgggcggaatg
atgtag
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