Rhizobium sp. BT03: QMO80_000992
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Entry
QMO80_000992 CDS
T09950
Symbol
hupB
Name
(GenBank) DNA-binding protein HupB
KO
K03530
DNA-binding protein HU-beta
Organism
rhiz
Rhizobium sp. BT03
Brite
KEGG Orthology (KO) [BR:
rhiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhiz03032
]
QMO80_000992 (hupB)
03036 Chromosome and associated proteins [BR:
rhiz03036
]
QMO80_000992 (hupB)
03400 DNA repair and recombination proteins [BR:
rhiz03400
]
QMO80_000992 (hupB)
DNA replication proteins [BR:
rhiz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QMO80_000992 (hupB)
Chromosome and associated proteins [BR:
rhiz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
QMO80_000992 (hupB)
DNA repair and recombination proteins [BR:
rhiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
QMO80_000992 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
WHO71973
LinkDB
All DBs
Position
complement(996330..996605)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKNELVSAVAEKAGLTKSDAASAVDAVFDVVQGELKNKGDIRLAGFGSFTVSHRAASKG
RNPSTGAEVDIPARNVPKFTPGKGLKDAVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatgaactcgtgtccgcagtcgccgaaaaggcaggactgacgaagtctgac
gcggcttccgctgttgacgcggtttttgacgttgtccagggtgaactcaagaacaagggc
gatatccgcctcgcagggttcggcagcttcaccgtttctcatcgtgccgcatcgaagggc
cggaacccgtcgacgggcgctgaagtcgacattccggctcgcaacgtgccgaagttcacg
cccggcaagggcctgaaggacgccgtcaacggctga
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