Rhizobium sp. BT03: QMO80_001931
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Entry
QMO80_001931 CDS
T09950
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
rhiz
Rhizobium sp. BT03
Pathway
rhiz02024
Quorum sensing
rhiz03060
Protein export
rhiz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhiz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
QMO80_001931 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
QMO80_001931 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QMO80_001931 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rhiz02044
]
QMO80_001931 (secD)
Secretion system [BR:
rhiz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
QMO80_001931 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
MMPL
SecD-TM1
Sterol-sensing
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
WHO72903
LinkDB
All DBs
Position
1955514..1958063
Genome browser
AA seq
849 aa
AA seq
DB search
MRTSPWLVFTYTVIILLGILIALPNVLPQSVLQRVPAWLPHEQVSLGLDLRGGSHLVLEV
DEADLTKERLQSLLQDARRVLREKGIQPKAVVRSQNQIVVTLADATQSDAAVTELKTLAN
PISTGLSAGQADLDVTANGATITVGFSRAGISANVDNAVQQSLEVIRQRVDQVGVSEPTI
QRIGANRVLVQLPGAQDPTRLRQLLGSTAKMSFHMVAPNNQPGPGITMMQDEEGRSYAVL
DRVEISGDRLSDARVSFDPNTHEPVVSFRFDSAGATRFADITRQNVGNPFAIVLDDKVLS
APNIREPITGGSGQISGNFSADSATTLAAMLRAGALPAKLTVIEERTVGADLGADAIKMG
IYSGIVGFALVALFIFVLYGTWGVLANIALLIHTILTFSALTLVGATLTLPGIAGVVLGI
GLAVDANVLINERIREETRKGKGAFAAIDTGFNRAYSTIIDGNMTALIAAAILFFFGSGP
VRGFAVTMALGLIISMFTSVAFVRVAMIEITRRRKFKVLNIRPLIPFSPYDKHIEFMKAR
FFGLTVSALLSIASVVLFIHPGLNYGVDFRGGIQMSVKTQGAADLAKFREGLDSLGLGEI
TLQSFGDNSSILVRAQRQEGGEEAQTAAVTKLKAEVTKIDPTATVEGTDVIGPKVSGELA
WAGILSVVIASLAMLIYIWVRFEWPFAVGAIVTLVLDVTKAIGFFAITGLDFNLTAIAAI
LTLVGYSVNDKVVVYDRMRENMRLYKSMPLREIIDKSINETLARSLYTNATAFLALVPMA
IWGGSAVSSFAIPMVFGILVAGASSIFIAAPILLFLGDWRRRHAKAAPATDGAVDIIPPE
QGRPRKSAS
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacttcaccatggctggtgttcacctatacggtgatcatccttctcggcatattg
atcgctttgccgaacgtcctgccgcaatccgtccttcagcgcgtgccggcatggctgccg
catgaacaggtgtcgctcggtctcgaccttcgcggcggctcgcatctcgttctggaagtc
gacgaagcggatctgaccaaggagcggctgcaatcgctgcttcaggacgcgcgccgcgtg
ctgcgcgaaaagggcatccagccgaaggccgtcgtccgcagccagaaccagatcgtcgtg
acactcgccgacgccacacagagcgatgccgccgtcaccgaactcaagacgctggccaac
ccgatcagcaccggtctcagcgccggccaggcggatctggatgtcacggcgaacggagcg
accattaccgtcggcttctcccgggccggcatctccgccaatgtcgataacgccgtccag
cagagccttgaagtcatccgccagcgcgtcgaccaggtcggcgtctccgagccgacgatc
cagcgcatcggcgccaaccgcgtgctcgtgcagctgcccggcgcacaggatccgacgcgg
ctgcgccaacttctcggctcgacggcgaagatgtcgttccacatggtggcgccgaacaac
cagcccggccctggtatcaccatgatgcaggacgaggaaggccggtcctatgctgttctc
gaccgtgtcgaaatctccggcgaccgcctttcggatgcccgcgtcagcttcgacccgaac
acgcatgagccggtcgtcagcttccgcttcgacagcgccggcgccacccgctttgccgat
atcacccgtcagaatgtcggcaatcccttcgccatcgtcctcgacgacaaggtgctgagc
gcacccaatatccgcgaaccgatcaccggcggctccggccagatctccggcaacttctca
gccgacagcgcgacgacgcttgccgccatgctgcgcgccggcgccctgcccgccaagctg
acggtcatcgaagaacgcaccgtcggcgccgacctcggggccgatgccatcaagatgggc
atctattccggcatcgtcggctttgctctcgtcgcgctcttcatcttcgtgctctatggc
acctggggcgtgctggcgaatatcgcgctgctgatccacacgatcctgaccttctcggcc
ctgacgctggtcggtgcgacgctgacgctgccgggcattgccggtgtcgttctcggcatc
ggccttgcggtcgatgcgaacgtcctcatcaacgagcgtattcgtgaagagacccgcaag
ggcaagggcgcctttgccgccatcgatacgggcttcaatcgtgcctattcgacaatcatc
gacggcaatatgaccgccctgatcgctgccgccatcctgttcttcttcggttccgggccg
gttcgcggctttgccgtgaccatggcgctcggtctgatcatctcgatgttcacctcggtc
gccttcgttcgcgtcgcgatgatcgagatcacccgccgccgcaagttcaaggtgctgaac
atccggccgttgatcccgttcagcccctatgacaagcacatcgagttcatgaaggcgcgc
ttcttcggcctcaccgtttcggcgctgctgtcgatcgcctccgtcgtgctcttcattcat
cccggtctcaactacggcgtcgatttccgcggcggcatccagatgtccgtcaagactcaa
ggggcggccgatcttgcgaagttccgcgaaggtcttgacagtctcggcctcggcgaaatc
acgctgcagtccttcggcgacaacagcagcattctcgttcgcgcccagcggcaggagggc
ggcgaagaggcgcagacggcagcggtgaccaagctgaaggcggaagtcaccaagatcgat
ccgaccgccaccgtcgaaggcaccgacgtcatcggcccgaaggtcagcggcgagcttgcc
tgggccggcatcctgtcggtggtgatcgccagcttggcgatgctgatctacatctgggtg
cggttcgaatggccgtttgccgtcggcgccatcgtcacgctggtgctcgacgtcaccaag
gcgatcggcttcttcgcgatcaccggcctcgacttcaacctgacggccatcgccgccatc
ctgacgctcgtcggctactcggtgaacgacaaggtcgtcgtctatgaccgcatgcgcgaa
aacatgcggctctacaagtcgatgccgctgcgcgagatcatcgacaagtcgatcaacgag
accctggcgcgaagcctctacaccaatgcgacggccttcctcgccctggtgccaatggcg
atctggggcggcagcgccgtctccagcttcgcgatcccgatggtcttcggcattctcgtg
gccggcgcctcgtcgatcttcatcgcggcaccgatcctgctcttcctcggcgactggcgc
cgccgccacgccaaggcggcaccggcaaccgatggcgccgtcgacatcatcccgccggaa
cagggccgcccgcgcaagtcggcgagctaa
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