Rhizobium sp. BT03: QMO80_002442
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Entry
QMO80_002442 CDS
T09950
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhiz
Rhizobium sp. BT03
Pathway
rhiz03030
DNA replication
rhiz03410
Base excision repair
rhiz03420
Nucleotide excision repair
rhiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QMO80_002442 (polA)
03410 Base excision repair
QMO80_002442 (polA)
03420 Nucleotide excision repair
QMO80_002442 (polA)
03440 Homologous recombination
QMO80_002442 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhiz03032
]
QMO80_002442 (polA)
03400 DNA repair and recombination proteins [BR:
rhiz03400
]
QMO80_002442 (polA)
Enzymes [BR:
rhiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QMO80_002442 (polA)
DNA replication proteins [BR:
rhiz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QMO80_002442 (polA)
DNA repair and recombination proteins [BR:
rhiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QMO80_002442 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QMO80_002442 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_polI_exo1
HHH_2
HHH
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
WHO73405
LinkDB
All DBs
Position
complement(2463808..2466807)
Genome browser
AA seq
999 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKTDGLPIGAVSGFCNMLWKLLRDARNTDVGVT
PTHLAVIFDYSAKTFRKDLYDAYKANRSAPPEELVPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARLAEASGADVTIVSSDKDLMQLVSPNVHMYDSMKDKQIGIPDVIEKWGVPPE
KMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLDRATEIKQVKRRETILANI
DMARLSRDLVRLRTDVPLDLDLDALVLEPQNGPKLIGFLKTMEFTTLTRRVAEVCDCDAN
AIEPAIVNIEWGKAAHGPDLDAAEPAPVAGGIPEVSGESVPVPPRAKAKASVEGAFSPAD
LAKARAEAFATLPFDHSAYVTIRDLATLDRWIADARDTGLVAFDTETTSLDAMQAELVGF
SLAIADNTADPTGTKIRAAYIPLAHKNGVGDLLGGGLADNQIPMRDALPRLKALLEDGAV
LKVAQNLKYDYLLMQRYGIETRSFDDTMLISYVLDAGTGAHGMDPLSEKFLGHTPIPYKD
VAGSGKANVTFDLVDIDRATHYAAEDADVTLRLWLVLKPRLAAAGLTSVYERLERPLLPV
LARMEARGITVDRQILSRLSGELAQGAARLEDEIYVLAGERFNIGSPKQLGDILFGKMGL
AGGSKTKTGQWSTSAQVLEDLAAAGFELPRKIVDWRQLTKLKSTYTDALPGYVHAETKRV
HTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLISADYSQIELRVLA
HVAEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAFGLAN
QLSIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSSNPSV
RAFNERAAINAPIQGSAADVIRRAMIRMEPALAEAGLAERVRMLLQVHDELIFEVENEDV
EKAMPIIVSVMENATMPALEMRVPLRVDARAASNWDEAH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcacctcttcctagtcgacggttccggtttcatcttccgggcgttt
catgcactgccaccgctgacccgcaagaccgacggcctgccgatcggcgccgtttccggt
ttctgcaacatgctgtggaagctgttgagggatgcgcgcaacaccgatgtcggcgtgacc
ccgacacatcttgccgtcatcttcgattattccgccaagacattccgcaaggatctctac
gacgcctataaggcgaaccgctccgccccgccggaagagctcgttccccagttcggcctg
atccgcgaggcgacccgcgccttcaacctgccctgcatcgagaccgaaggtttcgaggcc
gacgatatcatcgccacctatgcccgcctggccgaggcatcgggcgccgatgtcaccatc
gtctcatcggacaaggacctgatgcagctcgtcagcccgaatgtccatatgtatgacagc
atgaaggacaagcagatcggcattcccgatgtcatcgagaaatggggcgtgccgccggaa
aagatgatcgacctgcaggcgatgaccggcgattccgtcgacaatgttcccggcattccc
ggcatcggcccgaagaccgccgcccagctgctcgaggaatacggcgatctcgacacgctg
ctcgaccgcgccaccgagatcaagcaggtcaagcgtcgcgagacgatccttgccaatatc
gatatggccaggctctcgcgcgacctcgtgcggctgcgcaccgatgtgccgctcgacctc
gatctcgacgcgctggtgctggagccgcagaacggcccgaagctgatcggcttcctgaag
acgatggaattcacgacgctgacgcgtcgcgtcgccgaagtctgcgattgcgatgccaac
gccatcgaaccggcgatcgtcaacatcgaatggggcaaggctgcccatggccccgatctc
gacgcggccgaaccggcccctgttgccggcggcatccccgaggtctcgggcgaatcggtg
ccggtgccgccgcgcgcgaaggccaaggcttcagtcgaaggcgccttttcgcccgccgat
ctggccaaggcgcgggccgaagcctttgcgacgctgcccttcgatcattcggcctatgtg
acgatccgggatctcgccacgctcgaccggtggatcgccgatgcacgcgataccggcctc
gttgctttcgacacagagacgacgtcgctggatgcgatgcaggccgagcttgtcggcttc
tcgctggcgatcgccgacaatacggccgatcccaccggcacgaagatccgcgccgcctat
ataccgctcgcccacaagaacggcgtcggcgatctgctcggcggcggccttgccgacaac
cagatccccatgcgcgatgccttgccgcggctgaaggccctgctggaggacggcgcggtt
ctcaaggtcgcgcagaacctcaaatacgactacctgctgatgcagcgctacggcatcgag
accaggagtttcgacgacacgatgctgatctcctacgtgctcgacgccggcaccggcgcc
catggcatggacccgctctcggaaaaatttcttggccatacgccgatcccctacaaggat
gtggcgggcagcggcaaggcgaacgtcaccttcgatctcgtcgatatcgaccgcgccacc
cattatgccgccgaagatgccgacgtgacgctgcggctctggctggtgctgaagccgcgg
ctggcggcggcagggctgaccagcgtctatgaacggctggagcggccgctgctgccggtg
ctggcgcgcatggaagcgcgggggatcaccgtcgaccggcagatcctgtcgcgcctgtcc
ggtgagctggcccagggtgccgcgcgcctggaagacgagatctatgtgctggccggcgag
cggttcaatatcggctcgccgaagcagctcggcgatatcctgttcggcaagatgggcctt
gccggcggcagcaagacgaagaccggccaatggtccacctccgcgcaggtactcgaggat
ctcgccgccgccgggttcgagctgccgcgcaagatcgtcgactggcgccagctcaccaag
ctgaaatcgacctacaccgacgcgctccccggctatgtgcacgcggagaccaagcgggtc
catacttcctattcgctggcatcgacgacgaccggacgcctgtcctcctccgagccgaac
ctgcagaacattccggtgcgcaccgccgaaggccgcaagatccgcaccgccttcatctcg
acgccgggccacaagctgatctccgccgactacagccagatcgaactgcgcgtgcttgcc
catgtggccgagatcccgcagctgaccaaggccttcgaggatggcgtcgacatccatgcc
atgaccgcgtcggaaatgttcggcgtgcccgtcgaaggcatgccgggcgaggtgcgccgc
cgcgccaaggcgatcaatttcggcatcatctacggcatctcggccttcggccttgccaac
cagctgtcgatcgagcgttcggaagccggcgactacatcaagaagtatttcgagcgtttc
cccggaatccgcgactatatggaaagccgcaaggccatggcgcgcgacaagggctatgtc
gaaaccatctttggccggcgaatcaactaccccgaaatccgctcttccaacccgtcggtg
cgcgccttcaacgagcgcgccgcgatcaacgcgccgatccaggggtcggccgccgacgtc
atccgccgggcgatgatcaggatggagccggcgctcgccgaagccggccttgccgagcgc
gtccgcatgctgctgcaggtgcatgacgagctcattttcgaggtcgagaacgaggacgtc
gaaaaggcgatgcccatcatcgtctcggtcatggaaaacgccaccatgccggcgctcgaa
atgcgcgtgccgctgagggtcgatgcgcgcgctgccagcaattgggacgaggcgcattag
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