Rhizobium sp. BT03: QMO80_002614
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Entry
QMO80_002614 CDS
T09950
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rhiz
Rhizobium sp. BT03
Brite
KEGG Orthology (KO) [BR:
rhiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhiz03400
]
QMO80_002614 (addB)
Enzymes [BR:
rhiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QMO80_002614 (addB)
DNA repair and recombination proteins [BR:
rhiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QMO80_002614 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WHO73567
LinkDB
All DBs
Position
2653625..2656819
Genome browser
AA seq
1064 aa
AA seq
DB search
MAERHQPRILTIPAGLSFLKTLATTLCDGRLTPLFRHEADDPLSLARVTIYLPTRRAVRV
LRSEFVDLLGGRSAILPVIRPLGETDDDSGYFDEALPATIDLAQPLSNTARLLELARLIL
AWRNKLPEIVRHIHSDSPLVAPASPADAIWLARNLAELIDSIETEDLDWSELSKLDTGDY
AAWWQLTAEFLQIASAFWPERLSELGKSSPARHRNAILRAEANRLSATKPAGPIIIAGST
GSVAATADLIAAVANLPEGVIVLPGLDLSMPEQHWQMVAPELSPGQYANPASRSHPQYGL
SSLLKRLKLTRADVAILDRPEANLDRRAEILSRALVPAEATSDWGAWKSELPEGALSSAF
ADVSLIEAANEREEATAIAIALRLALERPGQDGESRAALITPDRNLARRVMAELSRFGIL
ADDSAGTPLAATPQGTLLQLLLEATLRPGDPVAIVSLLKHPLARFGLERDALISATEALE
LLALRGGVAEVDISRLEPLLTQQLGEQAQDRHAPQWRKALSPDAAEAAYDLARRVTQATE
PLASAVMRHRPEDRGRTASFTLSEWAERTGRSLEAVAADPHGNLADLWSGEAGDALAALL
GEVIDTSGQMEADGPQWIDIMAALAAGHAVKPRALSHPRLFIFGTLEARLQSVDTLILGG
LNEGTWPGQTANNPFIPRMMKTEIGLEPPERRIGQLAHDFEMANGTRHLIYSRALRQGST
PTVASRWLQRLLALAGEAFEAELKGRGNRFLQWAGLIDRGEAQAPAQRPSPKPPLTLQPT
SYSFSEVGRLRRDPYAIYARRILRLDAVDAFNRDPGAAERGTLYHKIIDRFIREAHVAGT
PDAAAAMERILSELFDMEQLPSHIDAVWRPRFRAVARAFLDWEAGRRPGIRKTLTEVRGG
IELEPINIRLNGVADRIDVTGPNGADIIDYKTGYNPSPAQARVLLDPQLALEAAALRGGA
FRDVGSLVPQDLLYVRLRPGRRFQVDTVNNESSARSDKAKSAMDLAEESIDQLVKFVTLL
QSGDKGFTSRLIPAQQFDFGGDYDHLARVSEWSTAETEEGGGDE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcaccagccacgcattctgacgatcccggcgggcctctccttcctgaaa
acgctggcgacgacgctttgcgacggccggctgacgccgctcttccggcatgaggccgac
gatccgctgtcgctagccagggtgacgatctatctgccgacccggcgcgccgtgcgtgtg
ctgcgttcggaattcgtcgacctgctcggcggccgctctgcgatcctgccggtcatccgc
cctctcggcgaaaccgacgacgacagcggttatttcgacgaggcgctgccggcaacgatc
gatcttgctcagccgctgtcgaataccgcccgtctgctggagcttgcccgcctcatcctc
gcctggcggaataaactgccggagatcgtccgccacattcattcggattcgccgctggtg
gcgccggcaagcccagcggatgcgatctggctcgcccgcaaccttgcagaactgatcgat
tcgatcgaaacagaagacctcgactggtcggaactctcaaaactcgacaccggcgattac
gccgcctggtggcagctgacggcagaattcctgcagatcgccagcgcattctggccggaa
cggctttccgaactcggcaaatcctcgccggcacggcaccgaaacgccattctcagggcc
gaagccaacaggctttcggcgacgaagcccgctggaccgatcatcatcgccggttcgacg
ggctcggttgccgccaccgccgatctcatcgccgctgtcgccaatctgcccgagggcgtg
atcgtgcttccgggccttgatctctccatgccggaacagcactggcagatggtggcgccg
gagctttcgccgggccagtacgccaatcccgcaagccgaagccacccccaatatggtctg
tcgtcgctgctcaagcggctgaagctgacgcgggccgacgtcgcgatcctcgacaggccg
gaagccaatctcgaccggcgcgccgaaattctgtcccgggcactcgtccctgcggaggcg
accagcgattggggcgcctggaagagcgagctgcccgaaggcgccctctcttcggctttc
gccgatgtctcgctgatcgaagccgccaacgaacgcgaggaggcgaccgcgattgccatt
gcgctccggctggcattggaaagaccggggcaggacggcgaaagccgggcagctctcatc
acccccgaccgcaatctcgcccgccgggtgatggcggaactttcccgcttcggtatcctc
gccgacgattcggccggcacgccgcttgcggccacgccgcagggcacgcttctgcaattg
ctgctggaagcaacactgcgcccgggcgatccggtggcgatcgtctcgctgctcaaacat
ccgctggcccgcttcggcctggaacgcgacgcattgatttccgccaccgaggcgctcgaa
ctgctggcgctgcgcggcggcgtggcggaggtcgatatcagcaggctcgagccattgctg
acccagcagcttggcgaacaggcgcaggacaggcacgcgccgcaatggcgaaaggcgctt
tcgcccgacgccgccgaggccgcctacgaccttgcccgccgggtcacacaagcgaccgag
ccgctggcttcggccgtgatgcggcaccggccggaagatcgcgggaggacggcaagtttt
accttgtccgaatgggcggagcgcacgggccgctcgcttgaagcggtggccgccgatcca
cacggcaatctcgccgatctctggtccggtgaagcgggagatgcgctcgccgccctgctc
ggcgaagtgatcgacaccagcggccagatggaggccgacgggccgcaatggatcgatatc
atggcagcacttgccgccggtcatgcggtgaagccgcgcgcgctcagccatccccgcctc
ttcatcttcggcacgctggaagcccgcctgcagagcgtcgatacgctgatcctcggcggc
ctgaacgagggcacctggccggggcagaccgccaacaatcccttcattccgcgcatgatg
aagacggagatcggactggagccgccggaacggcgcatcggccagctggcgcacgacttc
gagatggcgaacggcacgcgccatctgatctattcgagggcgctgcgccagggctcgaca
ccaacggtcgcctcgcgctggctgcagcggctgctggcgcttgccggagaggccttcgaa
gcggaattgaagggacgcggcaaccgcttcctccaatgggccggcctgatcgatcgcggg
gaagcccaggcgccggcgcagcgaccctcgccgaaaccgccgctgacgctgcagccgaca
tcctactccttcagcgaagtcggccggctgcgccgggacccttatgccatctatgcccgc
cgcatcctgcggctcgatgccgtcgatgcgttcaatcgcgatccgggagcggccgaacgc
ggcacgctctaccacaagatcatcgaccggttcattcgcgaagcccatgtcgcgggcacg
ccggatgcggcagcggcgatggagcgcatcctttccgagcttttcgacatggagcagctg
ccgtcgcatatcgatgccgtatggcggcctcgctttcgcgcggtggcccgcgccttcctc
gattgggaggcgggacggcggcccggcatccgcaagacgctgacggaggtgcgcggcggc
atcgaactggaaccgatcaatatccggctcaacggtgttgccgaccggatcgacgtcacc
ggaccgaacggcgccgacatcatcgactacaagaccggctacaatccctcgccggcgcag
gcgcgcgtgctgctcgatccgcagcttgcgctcgaagcggcggccttgcgcggcggcgcc
ttccgcgacgtcggcagtctcgtgccgcaggacctgctctatgtccgcctgcggccggga
cggcgttttcaggtcgataccgttaacaacgagagctcggcgcgcagcgacaaggcgaaa
tcggcgatggatcttgccgaggaatcgatcgaccagttggtcaaattcgtgacgttgctg
caatccggcgacaaaggcttcacctcgcggctcatcccggcgcagcaattcgatttcggc
ggcgactatgatcacctcgcccgcgtctccgaatggtcgacggcagaaaccgaagagggc
ggcggcgatgagtga
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integrated database retrieval system
