Rhizobium sp. BT03: QMO80_002858
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Entry
QMO80_002858 CDS
T09950
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rhiz
Rhizobium sp. BT03
Brite
KEGG Orthology (KO) [BR:
rhiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhiz03016
]
QMO80_002858 (thpR)
Enzymes [BR:
rhiz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
QMO80_002858 (thpR)
Transfer RNA biogenesis [BR:
rhiz03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
QMO80_002858 (thpR)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WHO73807
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All DBs
Position
2923594..2924187
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AA seq
197 aa
AA seq
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MPRLFTALEIPRNAAMSLSLLRGGLPGARWIDVENYHITLRFIGDVDGRTADEIVERLDR
IDRPEFQFRLEGIGSFGSKKPHSVWAGVSQSPEMYALQGEIERICQRIGLPPDPRKFTPH
VTLARLKSSRLDDVVQYLAGRGNFHTSTFTAPRFVLLSSRESVGGGPYLTEEVFPLHEAR
SAPSASSRLLQPVKSLV
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgccgagactgtttaccgccctcgaaattccgcgcaatgcggcgatgagcctttcattg
ctgcgcggtggcctccccggagcacgatggatcgatgtggagaattaccacatcaccctg
cgcttcatcggtgatgtcgacggccggacggccgatgaaatcgtagaacgcctcgaccgg
atcgatcggccggaattccaattccggctcgaaggcatcggttccttcggctcgaagaaa
ccgcattcggtctgggccggcgtttcgcagtcgccggagatgtatgccctgcagggcgag
atcgagcggatctgccagcgcatcggcctgccgccggatccgcgcaaattcacgccgcat
gtgacgctggcgcggctcaaatcctcgcggctcgacgatgtcgtgcaatatctggcggga
cgcggcaacttccacacatcaaccttcacggcgccgcgtttcgtgctgctgtcgtcgcgc
gaatcggtcggcggcgggccctacctcaccgaggaagtgttcccgctgcacgaggcgcgc
tcggcgcccagcgcttcgagcaggctgctgcagccggtcaagagcctggtatag
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