Rhizobium sp. BT03: QMO80_004073
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Entry
QMO80_004073 CDS
T09950
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhiz
Rhizobium sp. BT03
Pathway
rhiz03420
Nucleotide excision repair
rhiz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QMO80_004073
03430 Mismatch repair
QMO80_004073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhiz03400
]
QMO80_004073
Enzymes [BR:
rhiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QMO80_004073
DNA repair and recombination proteins [BR:
rhiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QMO80_004073
MMR (mismatch excision repair)
Other MMR factors
QMO80_004073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF4420
Motif
Other DBs
NCBI-ProteinID:
WHO74984
LinkDB
All DBs
Position
complement(4193785..4196262)
Genome browser
AA seq
825 aa
AA seq
DB search
MSNSFDDIPFFDEEPAEMARKPQPPAAPAGRVPAGGGIAARAMAARDGGSRPDYLAGLNP
EQTEAVETLEGPVLVLAGAGTGKTRVLTTRIAHILNTGRAFPSQILAVTFTNKAAREMKE
RIALLVGGAVEGMPWLGTFHSIGVKLLRRHGDLVGLRSDFTILDTDDVVRLIKQLIQAEG
LDDKRWPAKQFAGMIDTWKNKGLGPADIPEGDARAFANGRGRDLYFAYQARLTTLNACDF
GDLLMHPIAIFRKNPDLLKEYHGRFRYILVDEYQDTNTAQYMWLRLLAQRTKGEPQNVCC
VGDDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIAHNEGRLG
KTLFTDRSDPEDVKVQVHASWDSEEEARAIGEEIEQLQRGKHLLNDMAILVRASFQMREF
EDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVAQASDDLAFERIINTPKRGLGDTTV
RALHDYARARDIPMLAAAADIIETDELKPKARKALFDVIQSFRRWQELLENTPHTELAEQ
ILEESGYTDMWKNDKSAEAPGRLENLKELIRSMESFESMRGFLEHVSLVMDAETNENLDA
VSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGITRAKRRCH
IWFVSNRRIHGLWQSTLPSRFLDELPETHVEVAEMEQSYGGYGRGGYGQSRFDKSEPFAN
SYSTPGWKRAQANKTDATRDNWGSRSGHAVERIGYGESGPKGRTIDGELVAKSTSSEPSR
FTLGDRVFHLKFGNGNITGIEGNKLTIEFDRAGQKRVLDGFVERV
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatagtttcgacgatattcccttcttcgacgaagagccggccgagatggcgcgc
aagccgcagccacccgccgcacccgccggaagagtgcccgccggcggcggtattgccgcc
cgcgccatggcggcccgcgacggtggcagccggccggattatctcgccgggctgaacccc
gagcagaccgaagccgtcgaaactctggaaggcccggtcctcgtgcttgccggcgccggc
accggcaagacgcgcgtgctgacgacccgcatcgcccatatcctcaataccggccgcgcc
ttcccctcgcagatcctcgccgtcaccttcaccaacaaggccgcccgcgagatgaaggag
cgcatcgcgctgctcgtcggcggcgcggtcgaaggcatgccctggctcggcaccttccac
tcgatcggcgtcaagcttctgcgccgccacggcgatctcgtcggcctgcgctccgatttc
accattctcgataccgacgacgtcgtccgcctgatcaagcaactgatccaggccgaaggc
ctcgacgacaaacgctggccggccaagcagttcgccggcatgatcgacacctggaagaac
aaggggctcggcccggccgatatccccgagggcgatgcccgcgcctttgccaacggccgc
ggccgcgatctctatttcgcctatcaggcgcgcctgacgacgctgaatgcctgcgatttc
ggcgacctgctgatgcatccgatcgcgatcttccgcaagaacccggatctcctgaaggaa
tatcacggccgcttccgctatatactcgtcgacgagtaccaggacaccaacaccgcgcaa
tatatgtggcttcggctccttgcccagcgcaccaagggcgagccgcagaacgtctgctgc
gtcggcgacgacgatcagtcgatctatggctggcgcggcgccgaggtcgacaacatcctg
cgcttcgagaaggatttccccggcgccaaggtcatcaagctcgagcgcaactaccgctcg
accgaacatatcctcggagcggccgcccatctgatcgcccataatgaagggcggcttggc
aagacgctgttcaccgaccgctccgatcctgaggacgtcaaggtgcaggtgcacgcctcc
tgggattcggaggaggaagcccgcgccatcggcgaggagatcgagcagcttcagcgcggc
aagcatctgctcaacgatatggcgatcctcgttcgcgcctccttccagatgcgcgaattc
gaagaccgcttcgtcactctcggtctcaattaccgcgtcatcggcggcccgcgcttctac
gagcgcctcgaaatccgcgatgccatggcctatttccgcctcgtcgctcaagcctccgac
gacctcgccttcgagcgcatcatcaacacgccgaagcgcggtctcggcgatacgacggtg
cgcgccctgcacgattatgcgcgagcccgcgatatcccgatgcttgcggcagccgccgac
atcatcgaaacggacgaattgaagccgaaggcgcgcaaagccctcttcgacgtgattcaa
tctttccgccgatggcaggaactgcttgaaaacacaccgcataccgaactcgccgagcag
atcctcgaagagtccggctataccgacatgtggaagaacgacaagagcgccgaagcgccc
ggccgccttgagaacctcaaggaactgatccgctcgatggaaagcttcgagtcgatgcgc
ggctttctcgagcacgtctctcttgtgatggatgccgagaccaacgagaacctcgatgcc
gtctcgatcatgacgctgcactcggccaagggcctggaattcgacaccgtcttcctgccg
ggctgggaggaaggcctcttcccgcatcagcgctcgctcgatgaaagcggccgcgccggc
ctggaggaggaacgccgcctcgcctatgtcggcatcacccgcgccaagcgccgctgccac
atctggttcgtctccaaccgccgcattcacggcctctggcaatcgaccctgccctcgcgt
ttcctcgacgagctgccggagacccatgtcgaggtcgccgaaatggaacagagctatggt
ggctatggccgtggcggctacggccagtcccgcttcgacaaatcagaaccctttgccaat
tcctattccacccccggctggaaacgcgcccaggccaacaagaccgacgccacgcgcgac
aattggggcagccgctccggccacgccgtcgaacgtatcggctatggcgaaagcggcccg
aagggacggacgatcgacggcgagctggtggcaaaatccacctcgtcggaaccttcacgc
ttcaccctcggcgaccgcgtgttccatttgaaattcggcaacggcaacatcaccggcatc
gaaggcaacaagctgacgatcgagttcgaccgggctgggcagaagcgggtgctggacggg
ttcgtcgagcgcgtctga
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