Rhizobium sp. BT03: QMO80_005112
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Entry
QMO80_005112 CDS
T09950
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhiz
Rhizobium sp. BT03
Pathway
rhiz03030
DNA replication
rhiz03430
Mismatch repair
rhiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QMO80_005112
03430 Mismatch repair
QMO80_005112
03440 Homologous recombination
QMO80_005112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhiz03032
]
QMO80_005112
03400 DNA repair and recombination proteins [BR:
rhiz03400
]
QMO80_005112
Enzymes [BR:
rhiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QMO80_005112
DNA replication proteins [BR:
rhiz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QMO80_005112
DNA repair and recombination proteins [BR:
rhiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QMO80_005112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WHO76006
LinkDB
All DBs
Position
pRspBT03e:complement(167858..168838)
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AA seq
326 aa
AA seq
DB search
MSVQRDSQLDMFARASPAVAKARAPSRRPLSQPAGHSDEDMARTLEESGNYRILRKLTAR
PIATVRRPEFLRLGVILDTETTGLNHRSDEIIEIGAVGFTFDDDGGIGDIVGIYGGLQQP
SRPIPPEVTRLTGITDSMVEGQVIDSRSLSALIEPADLIIAHNAGFDRPFCEAFSRIFAG
KAWACSVSEIDWSARGFEGTKLGYLVGQAGYFHDGHRAVDDCHALLEILDREQGDGESPF
AELYRASQRSRIRIFAEHSPFEMKDHLKARGYRWSDGSDGRLKSWWIEVGEDDLDDELSY
LRSDIYRWKEAEPPIVRLTAFDRFKL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcagagagattcgcaactcgacatgtttgccagggcatcgccggcagtcgcc
aaggcgcgcgctccctcgcgccggccgttgtcgcagccggccggccattccgatgaagat
atggcgcgcacgcttgaagagagcggcaattaccgcatcctgcggaaactgaccgcccgg
ccgatcgcaacggtcagacggccggaatttctgcggctcggcgtcattctcgatacggag
acgaccggtctcaatcaccgcagcgacgaaatcatcgaaatcggcgccgtcggcttcaca
ttcgacgatgacggcgggatcggcgatattgtcggcatctatggcggcctgcaacagccg
tcgcggccgataccgccggaggttacccggctgaccggcatcaccgattcgatggtcgaa
ggccaggtcatcgacagcagatcgttgagcgcgctgatcgagccggcggatctgatcatc
gcccacaatgccggtttcgaccggccgttctgcgaagctttctccaggattttcgccggc
aaggcctgggcgtgctcggtttcggagatcgactggagcgcccgcggtttcgaaggcacc
aagctcggctatctcgtcggccaggccgggtatttccatgacggccaccgcgccgtggat
gactgccacgcgctgctggaaattctcgatcgagaacaaggcgacggtgaaagcccgttt
gccgagctttaccgcgccagccagcgctcgcggattcgcatttttgccgaacacagcccg
ttcgagatgaaggaccatctgaaggcgagggggtatcgctggtcggatggcagcgacggc
cggctgaagtcctggtggatcgaagtcggcgaagacgatcttgacgacgagctttcctat
ctgcgctcggacatctaccggtggaaagaggcagagccgccgatcgtgcggctgacggcc
ttcgatcgcttcaaactctga
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