KEGG   Rhizobium sp. BT03: QMO80_005499
Entry
QMO80_005499      CDS       T09950                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
rhiz  Rhizobium sp. BT03
Brite
KEGG Orthology (KO) [BR:rhiz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhiz02044]
    QMO80_005499 (tssF)
Secretion system [BR:rhiz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   QMO80_005499 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WHO76382
LinkDB
Position
pRspBT03d:complement(20526..22412)
AA seq 628 aa
MDPRLLRLYNDELAYMREMGAEFARAFPKVAARLGMESAEVADPYVERLLEGFAFMAARV
QLKLQSRFPEFTQHLLEMVYPHFLPPLPSMTIVRFEPDQDAGRLENGYLVPRGTKLLGRL
APGAVTHCEFRTAHDVHLWPIVVSAADYFSTPGQIAALDLPARQDAKAALRLRLRTTNGM
PFNKLGLEALTLHLTGPGGIGAALAEQLLGDACNIIARPVGRPIPWQEKIPVHALQQRGL
EPSCALLPEVPRSFDGYRLLQEYFALAERTLFVEVSGLADAVALSTAETLEIVFALRRVE
PRLERQLGPQNIVLFATPAINLFERQADLVHVSDKNTEHHVIVDRMRPLDFEVHSILEMS
GDGAKNEAAPVRFYPFYSISAHGQEEQHSRYYAIRREQRLMSEHQRLNGARTGYIGSETF
VSLVDRQAAPYSAELRHLSVNCLCSNRDLALLLPIGRDETDFTLEIGAPVTATRCVSPPS
RPRHSFANGDITWRLISHLSLNYLSISNSDRNDHRGAEALRELLRLYVDPVNAFASRQID
GIREIRSRPAVRRLSSGGQAAVARGIEVGIILDEAAFEGVGIFPLASVLNQFFAKYVSIN
SFTEMVVSTLQRGEVMRWPTMAGRRAIL
NT seq 1887 nt   +upstreamnt  +downstreamnt
atggatccccggctcctgcgactgtacaacgacgaacttgcttatatgcgcgagatgggg
gccgagttcgcccgcgcattcccgaaggtcgccgcccggctcgggatggaatcagcggag
gtcgccgacccctacgtcgagcggcttctggaaggcttcgctttcatggcggcgcgggtg
caattgaagcttcagtctcgctttccggaattcacccagcacctcctggagatggtctat
ccgcattttctaccgccgctcccctcgatgacgatcgtccgtttcgagcccgaccaggat
gccggacgacttgaaaatggatacctcgtgccgcggggaaccaagcttttgggccgtctt
gctccgggcgccgtcacacattgcgagttccgcacggcccatgatgtgcatctctggcca
attgtggtgagcgctgccgattatttttcgacgccggggcagatcgccgcactggatctt
ccggcccggcaagatgcgaaggctgctttgcgactacgccttcgcaccaccaatggcatg
ccgttcaataaactcggactagaggctctcacactgcacctaacaggccccggtggcatc
ggcgccgcactcgccgaacagcttctcggtgacgcatgcaatatcatagcccgtccggtc
ggccggcctatcccttggcaggaaaagattccggttcatgcgctgcagcaacgcggtttg
gagccgagctgtgctctcctgcccgaggtgccacgctctttcgacgggtaccgtctccta
caggagtatttcgccctcgcggagcggacgttgttcgtcgaggttagcgggctggcagac
gcagtagccctgtcaactgccgagacccttgagatcgtcttcgcactcagacgtgtcgag
ccacggctggaacgacagctcggaccccaaaatatcgttctcttcgcaacgcccgcgatt
aatctcttcgaacgccaggcagatctcgtccacgtgagcgacaagaacaccgagcatcat
gtgattgttgacaggatgaggccgctcgactttgaggtccactcgatcctcgagatgagc
ggagacggggcgaaaaacgaagcggctcccgtgaggttctacccgttctatagcatcagc
gcgcacggtcaggaggagcagcattccagatactacgcgatccgccgggagcagcgcctc
atgtcggagcaccagcgtctaaatggcgcgcggactggctacatcggcagcgaaacgttc
gtttctctagttgatcgccaagcggctccctattcggcggaactccggcatttgtctgta
aactgcctgtgctcgaaccgggatctggcgctgctgctgccgatcggccgggacgagaca
gacttcaccctggaaatcggcgctccagttaccgccacccggtgcgtatcgcccccgagc
cgaccgcgccactccttcgccaatggcgatatcacttggcgattaattagccatctttca
ctgaactacctctcgatcagcaattccgataggaacgaccaccggggcgcagaagcgcta
cgtgaactcctccgcctctacgtcgatccagtcaatgccttcgcctcacggcagatcgac
gggatccgggagattcggtccaggcctgcggtcaggcgattgtccagcggtggacaagcc
gccgtagcacgtgggattgaggttggtatcatcctggacgaagcggccttcgaaggcgtt
ggcatctttccgctcgcctccgtgctcaaccagttcttcgcgaaatacgtatccatcaac
agcttcaccgagatggtcgtctcgacgctacagcgcggggaggtaatgcgatggccgacg
atggccggccgccgggcgatcctttga

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