Rhizobium sp. BT03: QMO80_005556
Help
Entry
QMO80_005556 CDS
T09950
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
rhiz
Rhizobium sp. BT03
Pathway
rhiz02020
Two-component system
rhiz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rhiz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QMO80_005556 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QMO80_005556 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhiz03021
]
QMO80_005556 (rpoN)
Transcription machinery [BR:
rhiz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QMO80_005556 (rpoN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
WHO76422
LinkDB
All DBs
Position
pRspBT03d:91551..93002
Genome browser
AA seq
483 aa
AA seq
DB search
MKSFTSLHQRQQQSLVITPQLIASIRLLQLAHTELNQFVEQEIEKNPFLDLASNDGGASG
VSPTAADDPNISAREDHVDGPARTDMPELSSPWKSIRDTGNLSPGERPSLDEFAASTETL
HEHVAHQIALTAFTPQERLIAGALADHLDDTGYLQVNLLELAERLNSPEAGVKRVLEALQ
LFDPPGIFARSLGECLEIQLRQRDRFDPAMAALVANLELLARRDFRALKRRCRVDEDDLL
DMLNEIRALDPKPGNQFQSARSESIIPDVFVLPSPGGGWHVELNREILPKVLINQTYFAQ
VTRLTAQSSKDQSFLNECFQSASWLVRSLDQRATTILKVATEIVRHQDVFLEDGIAHLRP
LNLKTIADAIDMHESTVSRVTSNKYILTPRGVFELKYFFTVAIPSSQGGDAHSAEAVRHQ
IRALIAAETLHDVLSDDGIVAKLKETGVDIARRTVAKYREAMNIPSSAQRRREKRFVLAA
AEG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcctttacaagccttcatcagcgtcagcagcaatcgctggttattacgccccag
ctcatcgcgtctattcgcttgctgcagctggcgcacaccgaactgaatcagttcgtggaa
caggaaatcgagaagaacccatttctcgacctggcgtcgaatgacggcggggcttctggc
gtatcgccaactgcggcggatgatccaaatatcagcgcacgcgaagaccacgttgatgga
ccggccaggacggacatgcctgagctgtctagtccctggaaatcaatccgtgacacaggc
aacctttcgccgggggaaaggccttccctggatgagttcgccgcctcaactgagacattg
cacgaacatgtcgcccatcagatcgccctcactgccttcacaccccaggagcggctgatt
gctggcgcgcttgccgaccatctggatgacactgggtatctgcaagtgaaccttctggag
ctagcagagaggctaaatagccctgaggctggagtgaagcgggttcttgaggctttgcag
ctatttgacccgccgggcatatttgcgcgaagtctgggcgaatgcctcgagattcagttg
cgccaacgagaccggttcgacccggccatggcagctctggtcgcaaatctcgagttgctt
gcgcgacgcgattttcgagcactgaagcgacgttgccgggtcgatgaagacgaccttctc
gatatgttgaacgaaattcgtgcacttgacccaaagcctggaaaccagttccagtccgca
aggtcggaatccatcatacccgacgtcttcgtcctaccctcgccgggaggcggatggcac
gtcgagcttaatcgggagattttgcccaaggtactgatcaaccaaacctattttgcgcaa
gttactcgcctaaccgcccaaagctcgaaagatcagtcattcctgaacgaatgcttccag
agcgcgagctggttggttcggagtctcgatcagcgcgccacgacgatccttaaggtggcg
accgaaatcgtgcgccaccaggatgtctttttggaagatggcattgctcatcttcgccct
ctcaatcttaagaccatcgctgacgcgatcgacatgcacgagtccactgtaagtcgggta
acgtcgaacaaatacattctcacgccccgcggcgtgttcgagctcaagtattttttcacc
gtcgcgatcccgtcctcacaaggcggtgacgcgcactcggccgaagctgtgcgccatcag
ataagggcacttattgccgcagagacgctccatgatgtgctgtccgacgatggcatcgtt
gccaagctcaaggaaacaggcgtcgacattgctcgccgcacagtcgccaaatatcgcgag
gcgatgaacatcccctcgtccgcgcaacgccggcgggagaaacggtttgtactggcggcc
gcggagggataa
DBGET
integrated database retrieval system
