KEGG   Rhizobium sp. BT03: QMO80_005879
Entry
QMO80_005879      CDS       T09950                                 
Name
(GenBank) VirB4 family type IV secretion system protein
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
rhiz  Rhizobium sp. BT03
Pathway
rhiz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhiz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    QMO80_005879
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhiz02044]
    QMO80_005879
Enzymes [BR:rhiz01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     QMO80_005879
Secretion system [BR:rhiz02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   QMO80_005879
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 FtsK_SpoIIIE ATPase_2 AAA_16 T2SSE NPHP3_N AAA_7 TrwB_AAD_bind ABC_tran PIF1 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: WHO76678
LinkDB
Position
pRspBT03d:419242..421608
AA seq 788 aa
MSNIATLRSRELGPQTFIPYVRHVDETTIALESRALMTMIALDGVSFETSDVRDLNGLHR
SLNTLYRNIADERLALWTHVVRRRDNAYPEGRFANPFSDGLNARYRERMVREDLFRNNLY
LTLVWHPGRDPAEKAAKLLSRLRKARRSDTELDGQALKHLRDRVADVVAGLQRFGPRQLT
LHEHDGILFSEPSEVLHQIVGGRREPIPLTDGRISSAIYSDRVIFGRETVEIRHEADSRY
AGMFGFKEYPATTRSGMLDAILTAPFELILTQSFAFTSKADARTIMGRKQNQMVSAGDKA
ASQIEELGEAMDDLESNRFVLGEHHLALAVFAPSVKELTDHMGKARVYLTSGGSVVARED
LGLEAAWWAQLPGNFRYRARSGAITSRNFAALAPYHSYPAGKKDGNEWGPAVAMLKSASG
SPFYFNFHHGDLGNSFVCGPSGTGKTVLLNFMLSQLEKHDPHMVFFDKDRGADLFVRAAG
GTYLPLRNGVATGCAPLKALEFTAENKIFLTGWIAKLVRSGSGELSITELRDIASAVDGV
ADLPVERRSIGALRTFLNNTDPEGIAARLRRWERGGPLGWVFDNEADDIGIGARFIGYDM
TDFLDNEEIRTPLMAYLFNRIEQLIDGRRIIIVIDEFWKALQDEGFRDLAQNKLKTIRKQ
NGLMLFATQSPRDAIVSPIAHTIIEQCPTQIFLPNPRGDRADYVDGFKLTEREFELVSRE
LSVESRRFIVKQGHNSVVAELNLSGFDDELAILSGRTANVELADAIRSEIGEGREDWLAV
FHQRRKTA
NT seq 2367 nt   +upstreamnt  +downstreamnt
ttgtctaacattgcgacgctccggtcgcgcgagctcgggccgcagaccttcattccctac
gtcaggcatgtcgacgagacgaccattgcgctcgaatcccgagcgttgatgacaatgatc
gctctcgacggcgtttccttcgaaacatcagacgtcagggacctcaacggcctgcaccgc
agcctgaacacgctctaccgcaatatcgccgacgagcggctggcgctctggacgcatgtc
gtgcgccgccgcgacaatgcctatcccgagggacgcttcgccaatcccttctccgacggt
ctgaacgcgagatatcgggagcggatggtgagggaagacctgtttcgcaacaatctctac
ctcacccttgtctggcatcccggccgggatcctgccgaaaaggcggccaagcttctctcc
cggctgcgcaaggcccgccgatccgataccgagctcgacgggcaggctctgaagcatctg
cgtgaccgcgtggcggatgtcgtcgccggcctgcagcgcttcgggccgcggcagctcacg
cttcacgaacatgacggcatcctgttctccgagccgagcgaagtgctccaccagatcgtc
ggcggccggcgggaaccgattccgttgacggacggacgaatttcctcggcgatctattcc
gaccgggtaattttcgggcgcgagaccgtcgagatccgtcacgaggccgacagccgctat
gccggcatgttcggcttcaaggaatatccggcgaccacgcgcagcggcatgctcgacgct
atcctgacggcacctttcgagctcatcctgacgcagtcctttgccttcacctcaaaggcc
gatgcccgcacgatcatgggccgcaagcagaaccagatggtcagcgccggcgacaaggca
gcctcgcagatcgaggaactcggcgaggcgatggacgatctcgaatccaatcgcttcgtt
cttggggaacatcaccttgcgcttgccgtcttcgcgccctcggtcaaggagctgaccgat
cacatgggtaaggcgcgcgtctacctcaccagcggcggctcggtcgtcgcccgcgaggat
ctcgggctcgaggccgcctggtgggcgcaattgccgggcaatttccgctatcgcgcgcgc
tcgggcgcgatcacgtcgcgcaacttcgcagccctggcgccctatcattcctatccggca
ggcaagaaggacggcaacgagtggggaccggcggtcgccatgctcaagagcgcgtccggc
tcacccttctatttcaactttcatcacggcgatctcggcaacagtttcgtctgcggcccg
tcgggtacgggcaagacggtgctgttgaacttcatgctgtcgcagctcgaaaagcacgat
ccgcatatggtcttcttcgacaaggaccgcggcgccgacctcttcgtacgcgcagccggc
ggtacttatctgccgctgaggaatggtgtcgccaccggctgcgcgccgttgaaagcactg
gaattcactgcggaaaacaaaatattcctcaccggttggatcgccaagctggtccgatcc
ggatctggcgaactatcgatcaccgagttgcgcgacatcgcctcggcggtcgacggggtg
gcggacctgccggtggagcgtcgctccatcggcgccctgcgcaccttcctcaacaacacc
gatcccgagggcattgccgcacgtctgcgacgctgggagaggggcgggccgcttggctgg
gtcttcgacaacgaagccgacgatatcggcattggcgccaggttcatcggctacgacatg
accgatttcctcgacaacgaggagatccgcacgccgttgatggcgtacctgttcaatcgt
atcgagcagctgatcgacgggcgtcgcatcatcatcgtcatcgacgagttctggaaggcg
ctgcaggacgaaggttttcgcgatctcgcccagaacaagctcaagaccatccgcaagcag
aacggtctcatgctgtttgcgacccagagcccgcgcgacgccatcgtatcgccgatcgcc
cacacgatcatcgagcagtgcccgacccagatctttcttccgaacccgcgcggcgaccgc
gccgactatgtcgacggcttcaagctgactgagcgcgaattcgagctcgtctcacgagag
ctctccgtcgaaagccgccggttcatcgtcaagcaggggcacaacagcgttgtcgccgaa
ttgaacctcagcggcttcgacgacgagctcgccatcctctccggccggacggccaatgtc
gagcttgccgatgccatccgatcggagatcggcgagggacgggaggactggcttgccgtg
tttcaccagaggaggaagacagcatga

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