Rhizobium sp. BT03: QMO80_006336
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Entry
QMO80_006336 CDS
T09950
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K23237
AraC family transcriptional regulator, melibiose operon regulatory protein
Organism
rhiz
Rhizobium sp. BT03
Brite
KEGG Orthology (KO) [BR:
rhiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhiz03000
]
QMO80_006336
Transcription factors [BR:
rhiz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
QMO80_006336
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Cupin_2
AraC_binding
Cupin_6
AraC_binding_2
HTH_73
Motif
Other DBs
NCBI-ProteinID:
WHO77126
LinkDB
All DBs
Position
pRspBT03b:119156..120076
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AA seq
306 aa
AA seq
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MDLAESKVGTSAIYQPGASSIEGSPTALQMFHDHPLVMAMPHWHAQVEVNFVVRGTVHYR
MSDHEFRLNAGEMCLFWGGQPHQMDESSDDSLYAGAHLPLIYFFRLRLPISISSRLMKGE
TLLTSATDAADNENFARWFRYSKSGDSAKAQHAVDELLLRIERIALEPYSMTTSKTVASL
EGDQPHPNSSRSVARMCDFIAANFLQDIDTVDIARAADLHPKYAMNLFKRSTGMTLSKYV
TLLRLSRAQAMLMSEGANVLQVAMDSGFGSISAFNKSFRHIAGMSPSDFRRDIRLVTTVP
AGAFRN
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggatttggcggaaagtaaggtcggcacgagtgcaatctatcagcccggcgcaagcagc
atcgagggttcgccgacggcgctgcagatgtttcatgaccatccgctcgtcatggccatg
ccgcactggcatgcgcaggttgaggtcaacttcgtcgtgcgcggcactgtccattatcgg
atgagcgaccacgaatttcggctgaacgccggcgaaatgtgcctcttctggggtggccag
ccgcatcagatggacgaatcctcggatgattcgctctatgccggcgcccatctgccgctc
atttatttcttccggctgcgtctgccgatcagcatttccagccggctgatgaagggcgag
acgctgctgacctcggcgaccgatgccgccgacaacgagaatttcgcccgctggttccgc
tattccaaatcaggcgattccgccaaggcccagcacgcggtcgacgaattgctgctgcgc
atcgagcgcattgcgctcgaaccctattcgatgacgacatcgaagacggtcgcgagcctt
gaaggcgatcagccgcatccgaattcctcgcgcagcgttgcgcgcatgtgcgatttcatc
gccgccaatttcctgcaggacatcgatacggtcgatatcgcccgcgccgccgatctgcat
ccgaaatatgcgatgaacctgttcaagcgatcgacgggtatgacgctcagcaaatatgtg
acgctgctcaggctgtcgcgcgcccaggcgatgctgatgagcgaaggcgccaacgtactg
caggtggcgatggacagcggcttcggctcgatcagcgccttcaacaaatccttccgccat
atcgccggcatgtcgccatcggatttccgccgcgatatccggctggtaacgacggttcca
gccggcgccttccggaactag
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