Rhizobium sp. BT03: QMO80_006405
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Entry
QMO80_006405 CDS
T09950
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhiz
Rhizobium sp. BT03
Pathway
rhiz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhiz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QMO80_006405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhiz02000
]
QMO80_006405
Transporters [BR:
rhiz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
QMO80_006405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
CshA_repeat
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
WHO77194
LinkDB
All DBs
Position
pRspBT03b:196345..197982
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AA seq
545 aa
AA seq
DB search
MSFDQSEKTNLSRRNALKLGLAAGVGLTVFGMNARIVMADEGQVLKVAHPAFDQDWSPLR
GGGRTFRWNSIWWAAPMYFDSQGNIKPYVFTSWESADNTVWTFKIDPKAVFSDGSKITSA
DVKGSWEVASMPNTKSQRADQVLSKVKGYAEIAAGSGNELTGVATPDEGTVVVTLAAADP
IFFMRLANHIAPITKASQSRGSDGEEIIDWYKPENKPVFSGPFKLTSIDIDAGKITFEPN
ENFFGSKPKLARIDITSIEDNVTATSLIKSGEFNAHTELVTSTIIQDLGPEFSAGPLIPT
SQHFWFNISRAPMDDPKVRQALIMAVDRDGLFKASYPDGPHKKADQILNSVPGADNSGFE
PFPYDPAAAKKLLAESSYGGPERLPKILFVGISAPAIQAAAQFIAEQWRQNLGITAVDMK
PQQDAYAGPDQNSVQIFRDDVGTRVPDAVSYLTGSIASTSSNAQNKLGGYKNDKVDSALA
EAATKAADDPQRISLAQEAQKAFREDWAFIPWYSQAMSRWATKEVKGMEKNLDWQIAEPW
NISIG
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatcaatctgaaaaaaccaatctatcgcgccgcaacgcgctgaagctcggt
cttgcggccggcgtcggcctcaccgtgttcgggatgaatgcccgcatcgtgatggccgat
gagggccaggttctgaaggtcgcgcatccggccttcgaccaggactggtcgccgctgcgc
ggcggcggcaggacgttccgctggaattcgatctggtgggcggcgccgatgtatttcgac
agccagggcaatatcaagccttacgtcttcaccagctgggaatcggccgacaacacggta
tggaccttcaagatcgatcccaaggccgtcttctcggacggcagcaagatcacctcggcc
gacgtcaagggatcgtgggaagtcgcctcgatgccgaacaccaagagccagcgcgccgac
caggtgctgagcaaggtcaagggttacgccgaaatcgccgccggctccggcaacgagctg
acgggtgtggccacacccgacgagggcacggtcgtcgtgacgctcgccgctgccgatccg
atcttcttcatgcgcctggcaaaccacatcgcgccgatcaccaaagcgtcgcaatcgcgc
ggcagcgacggcgaggaaatcatcgactggtataagcccgaaaacaagccggtcttctcc
ggccccttcaagctgacgagcatcgatatcgatgccggcaagatcacattcgagccgaat
gagaacttcttcgggtcgaagccgaagcttgcccgcatcgacatcacctcgatcgaggac
aatgtcaccgcgacatcgctgatcaagtccggcgagttcaacgcccataccgagctcgtc
acttcgacgatcatccaggatctcggcccggaattctcggccggcccgctgatcccgacc
agccagcacttctggttcaacatctcccgcgcgccgatggacgatccgaaggtgcgccag
gcgctgatcatggcggtcgatcgcgacggcctgttcaaggcctcctatcccgatgggccg
cacaagaaggccgatcagatcctcaattcggttcccggcgccgacaattccggctttgag
ccctttccctatgatccggcagccgccaagaagctgcttgccgaatcgagctatggcggg
cccgagcgcctgccgaagatcctgttcgtcggcatttcggcgccggccatccaggccgcc
gcccagttcatcgccgagcagtggcgccagaatctcggcatcacggccgtcgacatgaaa
ccgcagcaggacgcctatgccggtccggatcagaactcggtccagatcttccgcgacgac
gtcggcacccgtgttcccgacgccgtttcctatctcacgggcagcatcgcctcgacctcg
tcgaacgcgcagaacaagctcggcggatacaagaacgacaaggtcgacagcgcccttgcc
gaagcggcgaccaaggctgcggacgatccgcagcgcatctctctcgcccaggaggcccag
aaggcgttccgcgaggattgggccttcatcccgtggtattctcaggcgatgtcgcgctgg
gccaccaaggaggtcaagggcatggagaagaacctcgactggcagatcgccgaaccctgg
aacatttcgatcggctga
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