Rhodoblastus sp. SSC7: HZY79_03290
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Entry
HZY79_03290 CDS
T06718
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhj
Rhodoblastus sp. SSC7
Pathway
rhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZY79_03290 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhj03019
]
HZY79_03290 (recQ)
03400 DNA repair and recombination proteins [BR:
rhj03400
]
HZY79_03290 (recQ)
Enzymes [BR:
rhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZY79_03290 (recQ)
Messenger RNA biogenesis [BR:
rhj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HZY79_03290 (recQ)
DNA repair and recombination proteins [BR:
rhj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HZY79_03290 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QLP96611
UniProt:
A0A7L5XVN8
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All DBs
Position
complement(689770..691566)
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AA seq
598 aa
AA seq
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MLARVFGYSDFRPGQGEIIDAWRAGRDVLAVMPTGSGKSMCYQLPALLDGGLTVVVSPLI
ALMRDQVRQLQALGVAAGALNSAQDPDETASIWRALREGSLRLLYVSPERLLVEGFAERL
KAAGARRLAVDEAHCVSEWGHDFRPDYRXLRRAAEALGDPPVLALTATAGRAVREDVVAR
LFGAQPEIFVHSFDRPNLDLAFAEKNAPRRQIEEFLARRRGDSGIVYCASRAATERLAAG
LTERGFPALPYHAGLDAATRQDHQDRFLQEDGLIMVATVAFGMGVNKPDVRFVIHADMPA
SVEAYYQEIGRAGRDGLPAHTLTLYSLEDMALRRRQIAEKAIDEERARIEHRRFGALGML
CEGVGCRRKRLLAYFDEPSEDCGKCDVCRGALTLDDATLDAQRXLSAVARTGQRFGAGHL
ADVLMGLETPSVAARGHDKIKTFGVGADRSKAFWQARLRQLFAAGALEEASAEHGGFRLT
ERGEAILLGRETISLPEPRLKSTERLSADQRRGKRRAAMEEAEAGPNARLLATLKKKRLE
RXREGVAAYMIFSDKTLIEMVETMPATLTELRRVQGVGEVKLARYGEMFLEALAEAAR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
gtgctggcgcgcgttttcggctattccgatttccgtccgggtcagggcgagatcatcgac
gcctggcgcgccgggcgcgacgtgctggcggtgatgccgacgggctcgggcaagtcgatg
tgctaccagcttcccgcgctgctcgacggcggtctcaccgtcgtcgtctcgccgctgatc
gccctgatgcgcgatcaggtgcgccagttgcaggcgttgggcgtcgccgccggcgcgctc
aattcggcgcaggatcccgacgagacggcgtcgatctggcgcgccttgcgcgagggatcg
ctgcgcctgctctacgtctcgcccgagcgattgctggtcgagggattcgcggaacgcctg
aaggcggccggggcgcgccgcctcgccgtcgacgaggcccattgcgtctccgaatggggc
cacgacttccgccccgattatcgcnggctgcgccgcgccgccgaggcgctcggcgatccg
ccggtgctggcgctcaccgcgaccgccggccgagccgtgcgcgaggacgtcgtcgcgcgg
ctgttcggcgctcagcccgagattttcgtccactccttcgaccgccccaatctcgatctc
gccttcgccgagaaaaacgcgccgcgccggcagatcgaggaatttctcgcgcgtcggcgc
ggcgacagcggcatcgtctattgcgcctcgcgcgcggcgaccgagcggctcgccgccggc
ctgaccgagcgcggctttccggcgctgccctatcacgccggcctcgacgcggcgacgcgg
caggaccatcaggaccggtttttgcaagaagacgggctgatcatggtcgccaccgtcgct
ttcggcatgggcgtcaacaagccggacgtgcgcttcgtcatccacgccgacatgccggcc
tcggtcgaggcctattatcaggagatcggccgcgccggccgcgacggtctgccggcgcac
acgctcaccctctattcgctggaggacatggcgctgcgccgtcgccagatcgccgaaaag
gcgatcgacgaggagcgcgcgcgcatcgagcatcgccgcttcggcgcgctcggcatgctg
tgcgagggcgtcggctgccggcgcaagcggctgctcgcctatttcgacgaaccgagcgag
gattgcggcaaatgcgacgtctgccgcggcgccctgacgctcgacgacgccacgctcgac
gcgcaaaggncgctctccgccgtcgcccgcaccggccagcgttttggagcgggccatctc
gccgacgtcctgatggggctggagacgccgtccgtcgccgcgcgcggccacgacaagatc
aagacctttggagtgggcgcggacaggtcgaaagccttctggcaggcgcgcctgcgccag
ctcttcgccgccggcgcgctggaggaggcgagcgccgaacatggcggcttccgtctcacc
gaaaggggcgaggcgattcttttgggccgcgagacgatctcgctgcccgagccgaggttg
aaatcgaccgaacgcctctccgccgatcaacgccgcggcaaacgccgcgcggcgatggag
gaggccgaagccggccccaacgcccgccttctcgccacgctgaagaagaagcggctggag
cgcgnncgcgagggcgtcgccgcctacatgatcttctccgacaagacgctgatcgagatg
gtcgagaccatgcccgcgaccttgaccgagctgcgccgcgtgcagggcgtcggcgaggtc
aagctggcacgctacggcgagatgtttctggaggcgctggcggaggcggcgcgctga
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