Rhodoblastus sp. SSC7: HZY79_10590
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Entry
HZY79_10590 CDS
T06718
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhj
Rhodoblastus sp. SSC7
Pathway
rhj03420
Nucleotide excision repair
rhj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HZY79_10590
03430 Mismatch repair
HZY79_10590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhj03400
]
HZY79_10590
Enzymes [BR:
rhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZY79_10590
DNA repair and recombination proteins [BR:
rhj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HZY79_10590
MMR (mismatch excision repair)
Other MMR factors
HZY79_10590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
PcrA_UvrD_tudor
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QLP97741
UniProt:
A0A7L5XYZ1
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All DBs
Position
2236866..2239187
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AA seq
773 aa
AA seq
DB search
MNPEQREAVEALDGPVLVLAGAGTGKTRVLTSRIAHILATGRARAHEILAVTFTNKAARE
MKHRIAALVGPAGEGMPWLGTFHSIGAKILRRHAELVGLKSDFTILDADDQVRLMKQIIQ
AENIDEKRWPARQLAILIDGWKNRGLTPDKIGAGEASAFANGRAGDLYQLYQQRLKVLNA
TDFGDLLLEGLRLLRENDDVLAQWRRRFRYMLVDEYQDTNVAQYLWLRLLANEQKNVCCV
GDDDQSIYGWRGAEVDNILRFEHDFPGAKVIRLERNYRSTGHILAAASHLIARNQDRLGK
TLFTDGEMGDKVEVAGVWDSEEEARVVGEDIEQLQRKGRSLDEVAILVRASFQMREFEER
FLTLGLPYRVIGGPRFYERMEIRDALAYLRVVAQPADDLAFERIVNTPKRGLGDATVQTL
HDHARRAGVPLTQAARMIVETEELKPKPRGTLRDLLAQFARWSSMIEATPHHELAETILE
ESGYTDMWQKDRSAEAAGRLENLKELIRSMEEFPDLAGFLEHVSLVMEAETAESGEKVSI
MTLHAAKGLEFEQVFLPGWEEGLFPHQRSLDENGRAGLEEERRLAYVGITRAKLRAKIFF
ATNRRIHGMWQTTIPSRFVDDLPAKHVEVVEAKGASFSSHAASRFDRMESFAGSSYATPG
WRRAQERGPARGTPAARRGPMTIEGELVAKSSATSGFSVGARVFHLKFGPGSVAIVDGNK
LTVDFDKAGRKMVLESFCRRPAERQSMIGGACASSKPWAARRSSVPRRRVVSG
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggagcagcgcgaggcggtcgaggcgctcgacgggccggtgctggtgctggcg
ggcgcgggcaccggcaagacgcgggttctcacctcgcgcatcgcgcatattctggcgacg
gggcgggcgcgggcgcatgagattctcgccgtcaccttcaccaacaaggcggcgcgcgag
atgaagcaccgcatcgccgcgctggtggggccggcgggcgagggcatgccgtggcttggc
accttccactccatcggcgcgaagatcctgcgtcgtcacgccgagctggtcgggctcaaa
tccgacttcaccattctcgatgcggacgatcaggtccgcctgatgaagcagatcatccag
gccgagaacatcgacgagaagcgctggccggcgcgccagctcgcgatcctgatcgatggc
tggaaaaatcgcggactgacgccggacaagatcggcgcgggcgaggcgtcggccttcgcc
aacggccgcgcgggcgatctgtatcagctttaccagcagcgcctgaaggtgctgaacgcg
acggatttcggcgatcttctgctcgaagggctgcggctgttgcgagagaacgacgacgtg
ctggcgcagtggcggcggcgcttccgctacatgctggtcgacgagtatcaagacaccaac
gtcgcgcaatatctgtggctgcgcctgctcgccaacgaacagaagaacgtgtgctgcgtc
ggcgacgacgatcagtcgatctatggctggcgcggcgccgaggtcgacaacatcctgcgc
ttcgaacatgattttccgggcgcgaaggtcatccggctcgaacgcaattaccgttcgacg
ggccatattctcgcggccgcctcgcatctgatcgcgcgcaatcaggaccggctcggcaag
acgctcttcaccgacggcgagatgggcgacaaggtcgaggtggcgggcgtgtgggactcn
gaggaggaggcgcgcgtcgtcggcgaggacatcgagcaactgcaacgcaagggacgatcg
ctcgacgaagtggcgatcctggtgcgcgcctcgttccagatgcgcgagttcgaagagcgc
ttcctgacgctgggattgccctatcgcgtcatcggcggcccgcgtttctacgaacgcatg
gagatccgcgacgcgctggcctatctgcgcgtcgtcgcgcagcccgccgacgacctcgcc
ttcgagcgcatcgtcaatacgcccaagcgcgggctcggcgacgcgacggtgcagacgttg
cacgatcacgcgcggcgcgccggcgttccgttgacgcaggcggcgcggatgatcgtcgag
acggaggagctgaagcccaagccgcgcgggacgctgcgcgacttgctggcgcagttcgcg
cgctggtcgtcgatgatcgaggcgacgccgcatcacgagctcgccgagacgatccttgag
gaatccggctacaccgacatgtggcagaaggaccgcagcgcggaggcggccgggcggctc
gaaaacctgaaggagctgatccgctcgatggaggagttccccgatctggcgggcttcctc
gaacatgtgtcgctggtgatggaggccgagaccgccgagagcggcgagaaggtctcgatc
atgaccttgcacgcggccaaggggctggagttcgaacaggtgtttctccccggttgggag
gaggggctgtttccgcatcagcgctcgctcgacgagaacggccgcgccgggctcgaagaa
gagcggcggctggcttatgtcggcatcacgcgcgccaagctgcgggcgaagattttcttc
gccaccaaccgtcgcatccacgggatgtggcagacgacgattccctcgcgtttcgtcgac
gatctgccggccaagcatgtcgaggtcgtcgaggcgaagggcgcgagcttctcaagccat
gcggcgtcgcgcttcgaccggatggagtccttcgcggggtcgagctacgcgacgccggga
tggcggcgggcgcaggagcgcgggccggcgcgcgggacgccggcggcgcggcgcgggccg
atgaccatcgagggcgagctggtggccaagtcgtcggcgacatcgggcttttcggtcggc
gcgcgggtgtttcacctgaaattcgggccgggcagcgtcgccatcgtcgacggcaacaag
ctgaccgtcgatttcgacaaggccgggcgcaagatggtgctggagagcttttgcaggcgg
ccggctgaacgtcagtccatgatcggcggcgcgtgcgcctcgtcgaagccctgggcggcg
aggcggtcgagcgtgccgagaaggcgcgtcgtgtcggggtag
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