KEGG   Rhodoblastus sp. SSC7: HZY79_10875
Entry
HZY79_10875       CDS       T06718                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
rhj  Rhodoblastus sp. SSC7
Brite
KEGG Orthology (KO) [BR:rhj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rhj02048]
    HZY79_10875 (cas8c)
Prokaryotic defense system [BR:rhj02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    HZY79_10875 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: QLP97777
LinkDB
Position
2302557..2304488
AA seq 643 aa
MSVLSALVRAYERLPDPPPFGFSMEKIGFVVSLRPDGAVAHVVDLRDAVGKKRVARTMLV
PQPVKRTVAVSPNLLWDKTAYALGVTAGEGKRTAQEHAAFVERHERLLAGVEDEGFAALL
AFLSGWSPERFDALGWPAEMKDQNVVFALESERLAGVYLHDRPAARSLIAREGGEGTGRA
AICLVTGERGPVARLHPSIKGVWGAQTAGAALVSFNLDAFASYGHEQGDNAPVSAYAAFA
YATALNRFLDRDSGRRLQLGDASVVFWADSEDAVARAMAEEMFRQMIDPAQLSGDDKATL
ADXATQERVKEDRAATAEIRDKLLRMARGEALDQIEPRLAAGVRFHVLGLAPNAARLAVR
FFYEDDFGALAKHYRDWLGDTTLEPLPADRPLPAFRRLALRTAPAMKDRNGVATFDAKAA
SPLLVGELLRAALTGAAFPVSLLSLLLMRVRGDHHLDASRMALIKAIIVRRLRLAGKLPP
RPDGTPDKEYLMRSDPEDANDARRLGRLFAVIERAQRAALGENLSATVADKFLAAASATP
GRLFPSLILAARTHHVKRLRNGHSDADWIASSEEARKMASILDRDIGRLVAPFGERGFPD
QHSAEEXGLFLIGYYQERWGKSPKAAPDAEIAITETDNEESAS
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgagcgtcctttccgcccttgtgcgcgcctatgagcgcttgcccgatccgccgcctttc
ggcttttcgatggagaagatcggttttgtcgtgtctcttcgtcccgacggcgcggtcgcg
catgtcgtcgatctgcgcgatgcggtcggcaagaaacgggtcgcgcggacgatgctggtt
ccccagccggtcaagcgcaccgtggctgtgtcgcccaatctgttgtgggacaaaaccgcc
tatgcgctcggcgtgacggcgggcgaaggcaagcggacggcgcaggagcacgccgccttc
gtcgagcggcacgagcgtctgctcgcgggcgtcgaggacgagggcttcgcggcgcttctc
gccttcctgagcggctggtcgccggagcgattcgacgcgctgggatggccggcggagatg
aaggatcagaacgtcgtcttcgcgctcgaaagcgagcggttggcnggggtctatctgcat
gatcgaccggcggcgcggtcgctgatcgcgcgggagggcggcgaagggaccgggcgggct
gctatctgcctcgtgaccggcgaacgcggccctgtcgcgcgtctgcatccgtcgatcaaa
ggcgtgtggggcgcgcagacggcgggcgcggcgctcgtctccttcaacctcgacgccttc
gcctcctacggccacgaacagggcgacaacgcgccggtgagcgcctatgcggccttcgcc
tacgccacggcgctcaaccgatttctcgaccgcgacagcggtcgccgccttcagctcgga
gacgccagcgtggtgttctgggcggattcggaagacgccgtcgcccgcgcgatggccgag
gagatgttccgccagatgatcgatccggcgcagctctccggcgacgacaaggcgacgctg
gctgacgangcgacgcaggagcgggttaaggaggatcgggccgcgacagccgaaatccgg
gacaagctgctgcggatggcgcgcggcgaggcgcttgaccagatcgaaccgcggctcgcg
gccggcgtgcggttccatgtgctcggcctggcgccgaacgccgcgcggcttgcggtgcgc
ttcttctacgaagacgatttcggcgcgctcgccaaacattatcgcgattggcttggcgac
acgacgctcgaacccctgcccgccgacagaccgcttcccgcgttccggcgtctcgcgctg
cgcaccgcgccggcgatgaaggaccgcaacggcgtggcgacgttcgacgccaaggcggcg
tcgccgcttctcgtcggcgagctgctgcgcgcggcgctgacgggcgcggcgtttccggtc
tcgctgctgtcgttgctgctgatgcgcgtgcgcggcgatcatcacctcgacgcctcgcgc
atggcgttgatcaaggcgatcatcgtgcggcgcctgcgcctcgccggaaagctgcctccg
cgtcccgacgggacgcccgacaaggagtatctgatgcgctccgatcctgaagacgccaac
gacgcacgtcgcctcggccggttgttcgcggtcatcgagcgcgcgcaacgcgcagcgctc
ggcgagaacctcagcgccaccgtcgccgacaagtttctcgccgccgcctcagcgacgccg
gggcgcctgttccccagtctgattctggcggcgcgcacgcatcacgtcaaacggctgcgc
aacggccattccgacgccgactggatcgcgtcgagcgaggaggcgcgcaaaatggcctcg
attctcgatcgcgacatcggccgcctcgtcgcgcccttcggcgagcgcgggtttcccgat
cagcactcggcggaagagcangggcttttcctgatcggttactaccaggagcgttggggc
aagagccccaaagcggcgccggacgccgagatcgccatcaccgagaccgacaacgaggag
agcgcgtcgtga

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