Rhodoblastus sp. SSC7: HZY79_11265
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Entry
HZY79_11265 CDS
T06718
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rhj
Rhodoblastus sp. SSC7
Pathway
rhj03410
Base excision repair
rhj03430
Mismatch repair
rhj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HZY79_11265 (recJ)
03430 Mismatch repair
HZY79_11265 (recJ)
03440 Homologous recombination
HZY79_11265 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhj03400
]
HZY79_11265 (recJ)
DNA repair and recombination proteins [BR:
rhj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HZY79_11265 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HZY79_11265 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HZY79_11265 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QLP98838
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Position
2387140..2388918
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AA seq
592 aa
AA seq
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MFLGVRTSARGFAWRDRLGAQQEGLATALSQRLGLPDALARLLAGRGVGVDEAEAYLDPT
IRALMPDPRVLTDMAAASDRLAQAVERRERVAIFGDYDVDGACSAALLADYLEAVGATTI
IHIPDRIFEGYGPNVAAIDALAEQGASLLVTVDCGTTSFEPLAHARRALDVVVLDHHQAP
ESLPAANAVVNPNRQDDLSGLGMLCAAGVVFMTLVDLNRTLRARGAFANRKAPDLLLGLD
LVALATVADVAPLSGLNRAFVRKGCELMRRRGRLGLAALCDAARVSGPPRSYHLGFLIGP
RVNAGGRIGDAXLGARLLRESDPVEATRIARQLDQLNRERQAIEIGMLAEAEAEAMASLG
KASXGAVIVTSAEGWHPGVVGLVASRLKERFRRPAVAIAFDGSRGTGSARSIAGVDLGRA
VRAAVESGVLIKGGGHAMAAGLTIEKARLGDLRAFLEARLGVAVAAAREVDGMEVDGALT
ARGLTLDLLEAIERAGPFGAGAPEPSFVLPRHRIADVFEVGESHLRVRAVAGDGASLNAI
AFRAVGAPLGDFLKTMRGESVHLLGHVSIDSHRGEQRPQFRLIDAADPGAQA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
ctgtttctcggcgtgcggacgtcggcgcgcgggttcgcctggcgcgaccggctcggcgcg
caacaggaagggctggcgacggcgctctcgcaacggctcggattgccggacgcgctggcg
cggctgctggcngggcgcggcgtcggggtcgacgaggcggaggcctatctcgaccccacc
atccgcgccctgatgcccgatccgcgcgtcctcaccgacatggcggccgcctccgaccgg
ctggcgcaggcggtcgagcggcgagagagggtggcgatcttcggcgactacgacgtcgac
ggcgcctgttcggcggcgctcctggccgactatctcgaagccgtcggcgcgacgacgatc
atccatatcccggaccgtatcttcgagggatacggccccaacgtcgccgccatcgacgcg
ctggcggagcagggcgcgagcctgttggtgacggtcgattgcgggacgacgagtttcgag
ccgctcgcgcatgcgcgncgcgcgctcgacgtcgtcgtgctcgaccaccaccaggcgcct
gaaagcttgccggcggcgaacgccgtggtgaacccgaaccggcaggacgatctttcgggc
ctcggcatgctctgcgcggcgggcgtggtgttcatgacgctggtcgacctcaaccgaacg
ctgcgcgcgcgaggcgccttcgccaaccgcaaggcgcccgatttgctgctcgggctcgat
ctcgtcgccttggcgacggtcgcggacgtggcgcccttgtcngggctcaaccgcgctttc
gtgcgcaagggctgcgagcttatgcgccgacgcggccgcctcggtctggccgcgctttgc
gacgcggccagggtttccgggccgccgcgcagctatcatctgggcttcctgatcgggccg
cgagtcaacgccggcgggcgcatcggcgacgccnngctcggcgctcggctgctgcgcgaa
agcgacccggtcgaggcgacgcgcatcgctcgccagctcgaccagctcaaccgcgagcgg
caggctatcgaaatcggcatgctggccgaagccgaggcggaggcgatggcctcgctgggg
aaggcgagcagnggcgccgtgatcgtcaccagcgccgagggctggcatccgggcgtcgtc
ggcctcgtcgcgtcgcgtctgaaggagcgctttcgccgtccggccgtcgccatcgccttc
gacgggtcgagaggaaccggctcggcgcgttcgatcgccggcgtcgatctcgggcgcgcn
gttcgcgcggcggtggagtccggcgttctgatcaaaggcggcggtcatgcgatggcggcc
ggtttgacgatcgaaaaagcgcgactcggagacctgcgcgcctttcttgaggcgcggctc
ggcgtcgccgtcgcggcggcgcgggaggtcgacggaatggaggtcgacggggcgctgacg
gcgcggggtctgaccctcgacctgctggaggcgatcgagcgggcggggccgttcggcgca
ggcgctccggaacccagctttgtcttgccgcggcaccgaatcgccgacgtgttcgaggtc
ggcgaatcgcatctacgcgtgcgcgccgtcgcgggcgacggcgccagcctgaacgccatc
gcttttcgcgccgtcggcgcgccgctcggcgattttctcaaaacgatgcgcggcgagagc
gtgcatctgctcggccacgtctcgatcgacagccaccgcggcgaacagagaccgcagttt
cgcctgatcgacgccgccgatccgggcgcgcaagcgtga
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