Rhodoblastus sp. SSC7: HZY79_12230
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Entry
HZY79_12230 CDS
T06718
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rhj
Rhodoblastus sp. SSC7
Brite
KEGG Orthology (KO) [BR:
rhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhj03009
]
HZY79_12230 (rimO)
Enzymes [BR:
rhj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HZY79_12230 (rimO)
Ribosome biogenesis [BR:
rhj03009
]
Prokaryotic type
ribosomal protein modification factors
HZY79_12230 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
QLP97985
UniProt:
A0A7L5XZM2
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All DBs
Position
2585029..2586369
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AA seq
446 aa
AA seq
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MTDARPAPKISFVSLGCPKALVDSERILTRLRAEGYELARKHDGADAVIVNTCGFLDSAK
AESLEAIGAALKENGRVIVTGCMGAEPEQIRAAYPEKDFSNLIAITGPQAYESVLSAVHQ
AVPPAHDPFLDLVPPQGVKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRPAAEVLR
EAEKLVGAGVKELLVISQDTSAYGVDLRYAESVWKDRAVRAKFYDLSKELGGLGAWVRLH
YVYPYPHVADVLPLMADGLVLPYLDIPFQHASPRVLKAMRRPGDQEXTLERIRSWREAVP
DLALRSTFIVGFPGESDEDFEMLLDWLKEAKLDRVGAFKYEPVKGAPSEALGLPAVPDAV
KESRWKRFMETQQAISARIQKAKVGKRLQVIIDEPGPTVAKGRSKADAPEIDGTVYVASR
RPLRAGEVVSVKIERAEAYDLYGTTG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgctcgccccgcccccaagatttccttcgtctcgctcggctgccccaaggcg
ctggtggattccgagcgcatcctcacgcggctgcgggccgagggctacgaactcgcgcgc
aagcatgacggcgcggacgccgtgatcgtcaacacctgcggctttctcgactcggccaag
gcggagtcgctcgaagcgatcggcgccgccctgaaagaaaacgggcgcgtcatcgtgacg
ggctgcatgggcgccgagcccgagcagatccgcgccgcctacccggaaaaggatttttcc
aacctcatcgccatcaccggcccgcaggcctatgagagcgttttgagcgcggtgcatcag
gccgtgccgcccgcgcatgatccgtttctcgatctggtgccgccgcagggcgtcaagctg
acgccgcgccattacgcctatctgaagatttcggaaggctgcaacaatcgctgcaccttc
tgcatcatccccaagctgcgcggcgatctcgtctcgcgcccggccgccgaggtgctgcgg
gaggccgagaagcttgtcggcgcgggcgtcaaggagttgctcgtcatctcgcaggacacg
tccgcctatggcgtcgatctgcggtacgcggagagcgtctggaaggatcgcgcggtgcgc
gcgaagttttacgatctgtcgaaggagctgggcgggctcggcgcctgggtgcggctgcat
tacgtctacccctacccgcatgtcgccgacgtgctgcccttgatggcggacgggctggtg
ctgccctatctcgacattccgttccagcacgcctcgccgcgcgtgttgaaggcgatgcgc
cgccccggcgatcaggaaagnacgctggagcgcatccgctcgtggcgcgaggcggttccc
gatctggcgttgcgctcgacctttatcgtcggcttccccggcgagagcgacgaggatttc
gagatgctgctggactggctgaaggaggccaagctcgaccgcgtcggcgccttcaaatac
gagccggtgaagggcgcgccctccgaggcgctgggcctgccggccgtgccggacgcggtg
aaggaaagccgctggaaacgcttcatggagacgcaacaggcgatctccgcacgcatccag
aaggccaaggtcggcaagcggttgcaggtgatcatcgacgagcccggcccgactgtggcc
aagggccgctcgaaggccgacgcgccggagatcgacggaaccgtctatgtggcgagccgc
cgcccgctgcgcgccggcgaggtggtgagcgtcaagatcgagcgggcggaggcgtatgat
ctttatgggacgacgggctga
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