Rhodoblastus sp. SSC7: HZY79_13110
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Entry
HZY79_13110 CDS
T06718
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rhj
Rhodoblastus sp. SSC7
Pathway
rhj03030
DNA replication
rhj03430
Mismatch repair
rhj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZY79_13110 (dnaE)
03430 Mismatch repair
HZY79_13110 (dnaE)
03440 Homologous recombination
HZY79_13110 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhj03032
]
HZY79_13110 (dnaE)
03400 DNA repair and recombination proteins [BR:
rhj03400
]
HZY79_13110 (dnaE)
Enzymes [BR:
rhj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HZY79_13110 (dnaE)
DNA replication proteins [BR:
rhj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HZY79_13110 (dnaE)
DNA repair and recombination proteins [BR:
rhj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HZY79_13110 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
T2SSK
tRNA_anti-codon
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QLP98119
UniProt:
A0A7L5Y012
LinkDB
All DBs
Position
complement(2779725..2783237)
Genome browser
AA seq
1170 aa
AA seq
DB search
MSPRRPLERFCPLGPGFVHLHTHTAFSLREGALTISRLIKMAVADRMPALAITDSNNLFG
ALEFSEKLAKEGVQPIVGLAATIDFGDGATFGGRFVQAEAGRGSVVLLAQTERGYENLMR
IASRLHLDPTPPDPPHIALDRLGSTDGVIALTGGXXGPLDRAIAFDRPEVAQARARTLAR
LFPGRLYVELQRHHLDAERRAEPLLIELAYAQGLPLVAANESYFAGSSDYEAHDALLAIA
DGATVGSPDRRQATPEHRFKTRSEMLALFADLPEATRNTVEIARRCSYRPTTRKPILPHY
TTLDGTPLDADEELRKQAADGLAARLAAHGCAPGLTREDYDKRLDFEXQTIIRMKFXGYF
LIVADFIKWAKDHDIPVGPGRGSGAGSLVAWSLTITDLDPMRFGLFFERFXNPERVSMPD
FDIDFCQTRRDEVIAYVRERYGEDRVAQIITFGSFLARGVVRNVGRVLEMPLGQVDKLAK
LVPKIPPSXISLKEAIDGEPRLREAMAQEERVKRLFDVAEKLEGLYSNASTHAAGVVIGD
RPLHELVPLYRDPASDMPATQFNMKWVEPAGLVKFDFLGLKTLTTLSTTVALLKRRGVEV
DLAKIPLDDKKTYEMLGRGETVGVFQVESAGMRKALSEMRADRLEDIIALVALYRPGPMA
NIPTYCARKLGDEQVEYLHPMMEPALKETFGVIIYQEQVMQIAQALAGYTLGEADMLRRA
MGKKIAAEMAAQRDRFVRGCVEGDDFVKGCAKGESPEAKANEIFDLLAKFADYGFNKSHA
AAYAVVSYQTAWCKANHPVEFLAASMTLDKSNTDKLSEFRNEARRLGIAVEAPSVQRSIV
DFDVRESERGLSIVYALSAVKGVGEAQAQSLVDARGETPFASLTDFAERLNPKQVNRRVL
ESLCAAGAXDTLEPERGRVHAGLETILAFANRVSDEKAAGQSALFGGGPVREELALPRAX
AWSQSERMKREFDAVGFFLSGHPLDAYETVIRKKRLESWASFSRAIKTGAKANSTLAATV
LERTERKTKSGSKMGIVMLSDPTGQYEAIMFQEGLNAFRDMLERGANVCVSLQANIEGED
VRARIVACEPLDTLAARAGKXLRIYVRDAAPMPSLRQRLTAQGEGEVFVVVMRERDKSEL
DVKLPGGYRVTPQIAGAIKAIPGVVAVEHV
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
gtgtctccaaggagaccccttgagcgattctgccccctcggacctggcttcgtccatctt
cacacccacaccgcgttctcgctgcgcgaaggcgcgttgacgatttcgcgtctgatcaag
atggcggtcgccgaccgcatgcccgcgctcgccatcaccgacagcaacaatctgttcggc
gcgctggagttctccgagaagctggcgaaagagggcgtgcagcccatcgtcggcctcgcc
gccacgatcgatttcggcgacggcgcgaccttcggcgggcgcttcgtgcaggcggaggcg
ggcaggggctccgtcgtgctgctggcgcagaccgaacgcggctacgaaaacctgatgcgg
atcgcctcgcgcctgcatctcgatccgacgccgcccgatccaccgcatatcgcgctcgac
cgtctgggctcaacggacggtgttatcgcgctcaccggcggcnctncgggaccgctcgac
cgcgccatcgccttcgaccggccagaggtcgcccaagcccgcgcccgcacgctggcgcga
ctctttcccggccgcctctatgtcgagctgcaacgccatcatctcgacgccgagcgtcgc
gccgagccgctgctgatcgaactggcttacgcgcagggcttgccgctggtggcggccaac
gaaagttatttcgccggctcgtccgattacgaggcgcatgacgctctgctcgccatcgcc
gacggcgcgacggtcggctcgcccgaccgccgccaggcgacgcccgagcatcgcttcaag
acgcgctcggagatgctggcgctgttcgccgatctgcccgaggcgacgcgcaacaccgtc
gagatcgctcggcgctgctcctatcggccgaccacgcgcaagccgatcctgccgcattac
acgacgctcgacggaaccccgctcgacgccgacgaggagctgcgcaaacaggccgccgac
ggcctcgccgcgcgcctcgccgcgcatggctgcgcgcccggcctcacgcgcgaggattac
gacaagcggctcgacttcgagncgcaaaccattatccgcatgaagttcnccggctacttc
ctgatcgtcgcggacttcatcaaatgggccaaggatcacgacatccccgtcggccctgga
cgcggctcgggcgcgggctcgctggtggcgtggtcgctcaccatcactgatctcgatccg
atgcgcttcggcctgttcttcgagcgcttcntgaatcccgagcgcgtgtcgatgccggac
ttcgacatcgacttctgccagacccgacgcgacgaggtgatcgcctatgtgcgcgagcgt
tacggcgaggatcgcgtggcgcagatcatcaccttcggctccttcctcgcgcgcggcgtc
gtgcgcaatgtcgggcgcgtgctggagatgccgctcggccaggtcgacaagctcgccaag
ctcgtccccaaaatcccgccaagcncgatcagcctgaaggaggccatcgacggcgaaccg
cgcctgcgcgaggcgatggcgcaggaggagcgcgtcaagcgcctgttcgacgtcgccgaa
aagctcgaaggactctattccaacgcctcgacccacgccgccggcgtcgtcatcggcgac
cgccccttgcacgagctggtgccgctctatcgcgatccggcctccgacatgccggcgacg
cagttcaacatgaaatgggtcgagccggccggcctcgtgaagttcgacttcctcggcctc
aagacgctgaccacgctgtcgacgacggtcgcgctgctgaagcggcgcggcgtcgaggtc
gatctcgccaagatcccgctcgacgacaagaagacctacgagatgcttggccgcggcgag
acggtcggcgtgttccaggtcgaaagcgcgggcatgaggaaggcgctctcggagatgcgc
gccgaccgtctggaggacatcatcgcgctggtcgcgctctatcgccccgggccgatggcg
aacatcccgacctattgcgcgcgcaagctcggcgacgagcaggtggagtatctgcatccg
atgatggagccggcgctgaaggagaccttcggcgtcatcatctatcaggagcaggtgatg
cagatcgcccaggcgctcgccggctacacgctcggcgaggcggacatgctgcgccgcgcg
atgggcaagaagatcgccgccgaaatggccgcgcaacgcgatcgcttcgtgcgcggctgc
gtcgagggcgacgacttcgtgaagggatgcgccaagggtgagagcccggaggccaaggcc
aacgagattttcgaccttctcgcgaagttcgccgattacggcttcaacaaatcgcacgcc
gccgcctatgcggtggtgtcgtatcaaaccgcttggtgcaaggccaaccaccccgtcgag
ttcctcgccgcctcgatgacgctcgacaagtcgaacaccgacaagctctccgaattccgc
aacgaggcgcgccgcctcggcatcgccgtcgaggcgccgagcgtgcaacgctccatcgtc
gatttcgacgtgcgcgaaagcgagcgcggcctgtccatcgtctacgcgctgtccgccgtg
aagggcgtcggcgaggcgcaggcgcagagcctcgtcgacgcgcgcggcgaaacgcccttc
gcctcgctcaccgatttcgccgagcgtctcaacccaaagcaggtcaaccgtcgcgttctc
gaaagtctttgcgccgcaggcgcanccgacacgctggagcccgagcgcggccgcgttcac
gccgggcttgagaccatcctcgccttcgccaatcgcgtcagcgacgagaaggcggcgggg
caatcggccttgttcggcggcggtccggtgcgcgaggagttggcgctcccaagggcgntg
gcgtggtcgcagagcgagcgcatgaaacgcgagttcgacgcggtcggcttcttcctctcg
ggccatccgctcgacgcctacgagacggtgatcaggaagaagcgccttgaaagctgggcc
tctttctcccgcgcgatcaagaccggagcgaaggcgaattcgacgctcgccgccacggtt
ctggaacgcacggaacgcaagacgaagtcgggctcgaagatgggcatcgtgatgctgtcg
gacccgaccgggcaatacgaggcgatcatgtttcaggaaggcctcaacgcgttccgcgac
atgctggagcgcggcgccaatgtctgcgtgtcgttgcaggccaatatcgagggcgaggac
gtgcgcgcccgcatcgtcgcctgcgagccgctcgacacgctcgccgcacgcgcgggcaag
nggctgcgcatctatgtgcgcgacgcagcgcccatgccctcgttgcgtcagcgcctcacg
gcgcagggcgagggcgaggtcttcgtcgtcgtcatgcgcgagcgcgacaagagcgaactc
gacgtgaagttgcccggcggctaccgcgtgacgccgcagatcgccggcgccatcaaggcg
atccccggcgtcgtggcggtcgagcatgtgtga
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