Rhodococcus sp. JS3073: OYT95_02695
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Entry
OYT95_02695 CDS
T10731
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
rhjs Rhodococcus sp. JS3073
Pathway
rhjs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rhjs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OYT95_02695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhjs03021
]
OYT95_02695
Transcription machinery [BR:
rhjs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OYT95_02695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Extensin_1
HTH_20
BLM_N
Motif
Other DBs
NCBI-ProteinID:
WAM15584
LinkDB
All DBs
Position
566048..567421
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AA seq
457 aa
AA seq
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MAATDTRQTADSTSESGPEAPVGAAATGTAPAAEEAPAKKPAAKKAPAKKAAAKKAPAKK
AAAKKAGGKKATAGKGADGEDVDEDSADMEDIDITEGDLAEVESDVVEVVAVGEDEETEE
PSEKDKASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAK
RIEAGLYATQIMQELSDSGEKLPAAQRRDMSWICRDGNRAKNHLLEANLRLVVSLAKRYT
GRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVH
MVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEG
DSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDE
IGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccaccgatacacgtcagactgctgattcgacttcggagtcaggaccggaagca
ccagtcggagcggcagccaccggcactgctccggcagccgaggaagctcccgcgaagaag
ccggcggccaagaaggctcccgccaagaaggcagcagcgaagaaggctcccgccaagaag
gcggcagccaagaaggcgggcggcaagaaggccacggccggtaagggcgcggacggcgag
gacgtcgacgaagactccgccgacatggaagacatcgacatcaccgagggcgacctcgcc
gaggtcgagtccgatgtcgtcgaggtcgtcgcggtcggcgaagacgaggagaccgaggag
ccgtccgagaaggacaaggcctccggcgacttcgtgtgggacgaggaggagtccgaagca
ctccgccaggcccgcaaggacgccgaactgaccgcgtccgccgactcggtccgtgcctac
ctcaagcagatcggcaaggtcgccctcctcaacgccgaagaggaggtcgagctcgccaag
cggatcgaggccgggctctacgcgacccagatcatgcaggagctgtccgattccggcgag
aagctccccgccgcccagcgccgggacatgagctggatctgccgcgacggaaaccgcgcc
aagaaccacctcctcgaggcgaacctccgcctcgtcgtgtcgctggcgaagcgctacacc
ggccgcggcatggcgttcctcgacctgatccaggaaggcaacctgggcctcatccgtgcc
gtcgagaagttcgactacaccaagggctacaagttctcgacctacgccacctggtggatc
cgtcaggccatcacccgcgcgatggccgaccaggcccgcaccatccgcatcccggtgcac
atggtggaggtcatcaacaagctcggccgcatccagcgtgaactcctgcaggacctgggc
cgtgagcccactcccgaagagctcgccaaggaaatggacatcacgcccgagaaggtgctg
gagatccagcagtacgctcgtgagcccatctccctcgaccagacgatcggcgacgagggc
gacagccagctcggcgacttcatcgaggactccgaggccgtcgtggccgtcgacgccgtg
tcgttcaccctgctgcaggatcagctgcagtcggtgctcgagacgctgtccgagcgtgaa
gcgggcgtcgtgcgcttgcgcttcggcctgaccgacggacagccccgcaccctcgacgag
atcggccaggtctacggggtcacgcgtgagcgcatccgtcagatcgagtccaagaccatg
tcgaagctgcgccacccgtcccggtcgcaggtgctgcgcgactacctggactga
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