Rhodococcus sp. JS3073: OYT95_03280
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Entry
OYT95_03280 CDS
T10731
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rhjs Rhodococcus sp. JS3073
Pathway
rhjs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhjs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OYT95_03280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhjs03019
]
OYT95_03280
03016 Transfer RNA biogenesis [BR:
rhjs03016
]
OYT95_03280
Enzymes [BR:
rhjs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OYT95_03280
Messenger RNA biogenesis [BR:
rhjs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OYT95_03280
Transfer RNA biogenesis [BR:
rhjs03016
]
Prokaryotic type
tRNA degradation factors
OYT95_03280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
S1_RRP5
KH_KhpA-B
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
WAM15690
LinkDB
All DBs
Position
complement(682712..684985)
Genome browser
AA seq
757 aa
AA seq
DB search
MTENSAVEVDEGVFESTAVIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDETMLLSATS
ASKHPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVD
GLRNEIQVVVTVMSLNPQDLYDVVAINAASASTQIAGLPFSGPVGGVRVALITSDENKAG
QWVAFPTVEQLENAVFDMVVAGRIVSGSGDDADVAIMMVEAEATDNVISLIDGGAQAPTE
SIVAEGLEAAKPFIARLCTAQQQLAAKASKPTGDFPVFPAYQDDVFAAVEAAAAEKLSAA
LTIAGKQERDDKTDEVKVEVLEQVAPNFEGREKELGAAFRSLTKKLVRQRILRDQFRIDG
RGITDIRSLSAEVAIVPRAHGSALFERGETQILGVTTLDMVKMAQQVDSLGPETTKRYMH
HYNFPPYSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALSSNGST
SMGSVCASTLALLNAGVPLKAPVAGIAMGLVSDQVDGETRYVALTDILGAEDAFGDMDFK
VAGTKDFVTALQLDTKLDGIPSKVLAGALSQAKDARATILEVMAEAIDTPDEMSPFAPRV
TAIKVPVDKIGEVIGPKGKMINSITEQTGANISIEDDGTVFVGATDGPSAQAAIDMINAI
ANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGSGKRIAKVEDVVSVGSKL
RVEIADIDNRGKISLIPVEEDGAAAPAEQSEEAAAEK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaattccgcagtagaggtcgatgagggcgtgttcgaatccaccgccgtgatc
gacaacgggtccttcggaacccgcaccattcgtttcgagaccggtcgcctcgcacagcag
gccgccggcgccgtcgtcgcctacctggacgacgagacgatgctgctgtccgcgacgagc
gccagcaagcaccccaaggagcacttcgacttcttccccctgacggtggacgtcgaggag
cgcatgtacgcagcgggccgtatccccggctcgttcttccgtcgtgagggccgtccctcc
acggacgcgatcctgacctgccgcctgatcgaccgcccgctgcgcccgtcgttcgtcgac
ggtctgcgcaacgagatccaggtcgtcgtcacggtgatgagcctgaatccgcaggacctg
tacgacgtggtcgcgatcaacgccgcgtccgcctccacccagatcgccggactgccgttc
tccggacccgtcggcggtgtgcgtgtcgcgctcatcacctcggacgagaacaaggccggc
cagtgggttgcattccccaccgtcgagcagctcgagaacgccgtcttcgacatggtcgtc
gccggccgcatcgtctccggcagcggtgacgacgccgacgtcgcgatcatgatggtcgag
gccgaggccaccgacaacgtgatctccctgatcgacggtggcgcgcaggctcccaccgag
tcgatcgtggccgagggcctcgaagcagccaagccgttcatcgcccgcctctgcaccgcg
cagcagcagctcgcggccaaggcctccaagcccaccggtgacttccccgtcttcccggcg
taccaggacgacgtgttcgcagccgtcgaggccgccgcagcggagaagctcagcgcagca
ctgaccatcgcgggcaagcaggagcgcgacgacaagaccgacgaggtcaaggtcgaggtc
ctcgagcaggtcgccccgaacttcgagggtcgcgagaaggaactgggcgcggcgttccgc
tcgctgacgaagaagctggtccgtcagcgcatcctgcgcgaccagttccgcatcgacggc
cgtggcatcacggacatccgttcgctgtcggccgaggtcgccatcgttccgcgtgcacac
ggttccgcgctcttcgagcgcggcgagacccagatcctgggtgtcaccaccctcgacatg
gtcaagatggcgcagcaggtcgattcgctcggacccgagacgaccaagcggtacatgcac
cactacaacttcccgccgtactccaccggtgagacgggacgcgtcggttcgccgaagcgc
cgcgagatcggtcacggcgcgctggcggagcgggcactcatgcccgtgctgccgagtgtc
gaggagttcccgtacgccatccgtcaggtctcggaggcactcagctccaacggttccacc
tcgatgggctccgtgtgcgcgtcgacgctcgcactgctcaacgccggtgtgccgctgaag
gctccggtcgccggtatcgccatgggcctcgtctccgaccaggtcgacggtgagacccgt
tacgtcgcgctcaccgacatcctcggtgccgaggacgcgttcggcgacatggacttcaag
gtcgcgggcacgaaggacttcgtcacggccctgcagctcgacacgaagctcgacggcatc
ccgtccaaggtcctcgccggcgcgctgtcgcaggccaaggatgcgcgtgcgacgatcctc
gaggtcatggccgaggccatcgacacccccgacgagatgagcccgttcgctccgcgcgtc
acggccatcaaggtccccgtcgacaagatcggtgaggtcatcggccccaagggcaagatg
atcaactccatcaccgagcagaccggcgccaacatctccatcgaagatgacggcaccgtg
ttcgtcggtgcgacggacggcccgtccgcgcaggccgcgatcgacatgatcaacgccatc
gccaacccgcagctgccgaaggtcggcgagcgcttcctgggcacggtcgtcaagaccacc
gccttcggcgcgttcgtgtcgctcctccccggccgcgacggattggtgcacatctcgaag
ctgggcagtggcaagcgcattgcgaaggtcgaggacgtcgtgagcgtcggctcgaagttg
cgtgtcgagatcgccgacatcgacaaccgcggcaagatctcgctgatccccgtcgaagaa
gacggcgctgcggctccggccgagcagagcgaagaggcggctgccgagaagtag
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