Rhodococcus sp. JS3073: OYT95_03300
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Entry
OYT95_03300 CDS
T10731
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhjs Rhodococcus sp. JS3073
Brite
KEGG Orthology (KO) [BR:
rhjs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhjs03016
]
OYT95_03300 (truB)
Enzymes [BR:
rhjs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OYT95_03300 (truB)
Transfer RNA biogenesis [BR:
rhjs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OYT95_03300 (truB)
Prokaryotic type
OYT95_03300 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
LPP
Motif
Other DBs
NCBI-ProteinID:
WAM15694
LinkDB
All DBs
Position
complement(687547..688464)
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AA seq
305 aa
AA seq
DB search
MSAREKPSSGLVGAGLLIVDKDAGVTSHDVVARCRKLLGTRKVGHAGTLDPMATGVLVLG
VERATKLLGLLALTTKAYTATIRLGQATTTDDAEGEVVASADASGVTDDEIAAQVHTLTG
DIQQIPSSVSAIKVDGRRAHALIRAGEEFELAPRSVTVSRFEVIGRRTEGTFVDLDVEVE
CSSGTYVRALARDLGIALIGVGGHLTSLRRTRVGPFTLEHARTLEQLAEEPGVSLDIDAA
AQTAFPHRQIDADEAESISQGRWLEPIGIKGVYAAIDPSGHTIALLQERGRRASSVMVVR
PATLR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgcacgtgaaaagccctcttccggtctcgtcggcgccggactgctcatcgtcgac
aaggacgcgggcgtcaccagccacgacgtggtggcccggtgccgcaagctgctcggcacc
cggaaggtcgggcacgcgggcactctcgacccgatggccaccggggtgctggtgctcggt
gtggagcgggcgacgaagctgctggggctcctcgctctgaccaccaaggcgtacacggcc
acgatccggctgggtcaggccaccaccaccgacgacgccgagggcgaggtcgtcgcgtcc
gccgatgcgtccggcgtgacggacgacgagatcgccgcgcaggtgcacaccctcaccggc
gacatccagcagatcccgtcgagcgtcagcgccatcaaggtggacggccggcgggcgcac
gcactgatccgtgcgggcgaggagttcgaactcgctccccgttcggtcacggtgtctcgg
ttcgaggtgatcgggaggcgcaccgagggcacgttcgtcgacctcgacgtcgaggtggaa
tgttcctccggcacgtacgtccgggcgctcgcgcgtgatctggggatcgcgctgatcggc
gtcggcgggcacctcacttcgctgcgtcggacccgggtgggaccgttcacgctcgagcac
gcgcggacgctggagcagctggccgaggaaccgggggtcagtctcgacatcgacgccgcc
gcgcagaccgcgttcccgcaccggcagatcgacgcggacgaggccgaatcgatcagtcag
ggcaggtggctcgagccgatcggaatcaagggggtctacgccgccatcgatccgagtggg
cacacgatcgcgctgctccaggagcggggacggcgggcaagctccgtgatggtggtccgc
cccgcgaccctgaggtag
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integrated database retrieval system
