Rhodococcus sp. JS3073: OYT95_05285
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Entry
OYT95_05285 CDS
T10731
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rhjs Rhodococcus sp. JS3073
Pathway
rhjs00020
Citrate cycle (TCA cycle)
rhjs00190
Oxidative phosphorylation
rhjs00650
Butanoate metabolism
rhjs00720
Other carbon fixation pathways
rhjs01100
Metabolic pathways
rhjs01110
Biosynthesis of secondary metabolites
rhjs01120
Microbial metabolism in diverse environments
rhjs01200
Carbon metabolism
Module
rhjs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhjs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhjs_M00149
Succinate dehydrogenase, prokaryotes
rhjs_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rhjs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OYT95_05285 (sdhA)
00650 Butanoate metabolism
OYT95_05285 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
OYT95_05285 (sdhA)
00720 Other carbon fixation pathways
OYT95_05285 (sdhA)
Enzymes [BR:
rhjs01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
OYT95_05285 (sdhA)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
DAO
Pyr_redox_2
FAD_oxidored
DUF6020
Motif
Other DBs
NCBI-ProteinID:
WAM16045
LinkDB
All DBs
Position
1089613..1091364
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AA seq
583 aa
AA seq
DB search
MQEHRYDVVIVGAGGAGMRAAIEAGPRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLADQDAVEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYALDIAITETENGPVATGV
IAYELATGEIHVFHAKSIVFATGGSGRMYKTTSNAHTLTGDGMGIIFRKGLPLEDMEFHQ
FHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLAPRDIVARSMVLEVLEG
RGAGPNKDYVYIDVTHIPEEVLDEKLPDIMEFSRTYLGVDPVKEPVPVYPTCHYVMGGIP
TRINGEVLRNNDEIVQGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAAEHANN
SEFVDMPEAPEKMVDDWMATILSDHGHERVADIRSELQQSMDNNASVFRTEERLTQALAD
VRALKERYNHITVQDKGKRYNSDLLEAVELGFLLEMAEVTVVGALNRKESRGGHAREDYP
DRNDAEYMKHTMAYKEGDGLLSDIRLDYKPVVQTRYEPMERKY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacaccgttatgacgtggtcatcgtcggtgccggcggcgccggcatgcgcgca
gcgatcgaggctggtccccgcgcccgcaccgcggtactgaccaagctctaccccacccgc
agccacaccggcgcggcccagggcggcatgtgcgccgcactggcgaacgtggaggaagac
aactgggagtggcacaccttcgacacggtcaagggcggcgactacctcgccgaccaggac
gccgtcgagatcatggccaaggaggccatcgacgcggtgctcgacctcgagaagatgggt
ctgccgttcaaccgcacgcccgagggcaagatcgaccagcgtcgtttcggtggtcacacc
cgcgatcacggtaaggcccccgtgcgccgcgcatgttatgccgcggaccgcaccggccac
atgatcctgcagacgctctaccagaactgcgtcaagcacgacgtcgagttcttcaacgag
ttctacgccctcgacatcgcgatcaccgagacggagaacggcccggtcgccaccggcgtc
atcgcctacgagctggccaccggcgagatccacgtcttccacgcgaagtccatcgtgttc
gccaccggcggctcgggacgcatgtacaagacgacgtccaacgcgcacaccctcaccggt
gacggcatgggcatcatcttccgcaagggtcttccgctggaggacatggaattccaccag
ttccatcccacaggcctggccgggctcggcatcctcatctccgaggccgtgcgcggtgag
ggcggcatcctccgcaacgccgacggcgaacggttcatggagcgctacgcccccaccatc
aaggacctcgcaccccgcgacatcgtcgcgcggtcgatggttctcgaagtcctcgaggga
cgcggcgcgggaccgaacaaggactacgtctacatcgacgtgacccacatccccgaggaa
gtcctcgacgagaagctccccgacatcatggagttctcccgcacctacctcggtgtggac
ccggtcaaggaacccgtgccggtgtaccccacctgccactacgtcatgggcggcatcccc
accaggatcaacggtgaggtcctgcgcaacaacgacgagatcgtccagggcctgtacgcc
gccggcgagtgcgcctgcgtctccgtccacggcgcgaaccgtctcggcaccaactcgctg
ctcgacatcaacgtcttcggacgccgcgccggcatcgccgccgccgagcacgccaacaac
agcgagttcgtcgacatgcccgaggcacccgagaagatggtcgacgactggatggccacc
atcctgtcggaccacggtcacgagcgggtcgcggacatccgcagcgagctgcagcagtcc
atggacaacaacgcctccgtgttccgcaccgaagagcgcctcacccaggcactcgcggat
gtgcgcgcactcaaggagcgctacaaccacatcacggtgcaggacaagggcaagcgctac
aacagcgacctgctcgaggccgtcgagctcggcttcctcctcgaaatggcggaggtcacc
gtggtcggcgcgctgaaccgcaaggaatcgcgcggcggccacgcccgcgaggactacccg
gaccgcaacgacgccgagtacatgaagcacacgatggcatacaaggagggcgacggcctg
ctctccgacatccgtctcgactacaagccggtagtccagacccgctacgagccgatggag
cgtaagtactga
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