Rhodococcus sp. JS3073: OYT95_05655
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Entry
OYT95_05655 CDS
T10731
Symbol
tnpB
Name
(GenBank) IS607 family element RNA-guided endonuclease TnpB
KO
K07496
putative transposase
Organism
rhjs Rhodococcus sp. JS3073
Brite
KEGG Orthology (KO) [BR:
rhjs00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
OYT95_05655 (tnpB)
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
Motif
Other DBs
NCBI-ProteinID:
WAM16111
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Position
complement(1165302..1166738)
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AA seq
478 aa
AA seq
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MIRAFVYVLDPTPEQVEAMRSHCGAQRFAYNWALSRVKANLDQRAAERSYEIPDSELTPL
VSWSAYSLRKHWNTVKNAIAVNPETGQPWWPENSKEAYSSGIANCAAALSNWSNARSGKR
KGSMGFPRFKSKRAVPSCRFTTGSFGLVTDGGDRRRVQLPRIGAIRTCESSRKLARRTIA
GAARIRSATLSFRRGRWQVSFSVEITLPARALPPVAAGPRSVVGVDVGVKHLAVLSTGEM
IDNPKHGRKRAKKLRRLGRRASRRVGPDRRTGQQPSRRWLRTQEQIRAVHTRIADARRDH
LHKLTTRLVRDFDTVVVEDLHIAGMTRSGGAYKRGLNRALHDAALAEIRRQLTYKTDWTG
TGLHVADRWYPSSKTCSDCQVVKNKLPLNVRVFTCDACGFRADRDHNAALNLAALAAVVD
GGASSASCGRDVKEARQKPTIRPATRRADGIAAGTPPSGERGRGNPDTHAEGTKRHSA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgtgcttttgtgtatgtcctcgatccgaccccggagcaggtcgaggcgatgcgg
tcgcactgtggggcgcagcgtttcgcctataactgggcactgtcgcgggtgaaagcgaac
ctcgaccaacgcgctgcggagcggtcgtatgagatcccggactcggagttgacgccgctg
gtgtcgtggtccgcgtacagcctgcgcaaacactggaacaccgtcaaaaacgccatcgcc
gtcaaccctgagaccgggcagccgtggtggccggaaaactcgaaagaggcgtacagttcc
ggaatcgcgaactgcgctgcagccctatcgaactggtccaatgcccggtccgggaaacgg
aaaggctcgatggggttcccccgcttcaaaagcaaacgagcggtgccctcctgccgattc
accaccggcagtttcgggttggtcaccgacggcggcgaccgccgtcgtgtgcagttgcct
cggatcggggcgatccggacgtgcgaatcgtcccgcaaactggcccgcaggacgatcgcc
ggggcggctcggattcggtcggcgaccctctcgtttcgtcggggccggtggcaggtgtcg
ttctccgtcgaaatcactctccccgccagggcactcccgcccgttgccgctggtcctagg
tcggtcgtgggggtggatgtgggggtcaagcaccttgcggtcctctcgaccggcgagatg
atcgacaatccgaaacacggacgtaagcgggcgaaaaaacttcgccggctcgggcgccgc
gcatcgcggcgggtcggcccggatcgccgcaccggtcaacaaccctcccggcgttggctg
cgcacccaggaacagatccgggcggtgcacacccgcatcgccgacgcgcgccgcgatcac
ctgcacaaactcaccacccggttggtgcgggacttcgacaccgtcgtcgtcgaagacctc
cacatcgcagggatgacccgttccggtggcgcctacaaacgggggttaaaccgcgccctg
catgatgcggcgctcgccgagatccggcggcaactgacctacaagaccgattggaccggc
accggtctgcatgtggcagaccggtggtatccgtcgagtaagacctgctcggactgccag
gtagtgaaaaacaagctacctctgaatgttcgggtgttcacctgcgatgcgtgcggattc
cgcgcggatcgtgatcacaacgccgccctcaacctcgctgcactcgcagcggttgttgac
ggtggtgcgtcttcggcgagttgcggacgagacgtaaaagaagcccgacagaaaccaacc
ataagacccgccactcggcgggcagacggtatcgctgcgggaacaccaccgagtggtgaa
cgtggccggggtaacccggacactcatgccgaaggcactaaacgacactcagcatga
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