Rhodococcus sp. JS3073: OYT95_25350
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Entry
OYT95_25350 CDS
T10731
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhjs Rhodococcus sp. JS3073
Pathway
rhjs00061
Fatty acid biosynthesis
rhjs00071
Fatty acid degradation
rhjs01100
Metabolic pathways
rhjs01212
Fatty acid metabolism
rhjs02024
Quorum sensing
rhjs04146
Peroxisome
Module
rhjs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhjs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OYT95_25350
00071 Fatty acid degradation
OYT95_25350
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OYT95_25350
09145 Cellular community - prokaryotes
02024 Quorum sensing
OYT95_25350
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhjs01004
]
OYT95_25350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhjs04147
]
OYT95_25350
Enzymes [BR:
rhjs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OYT95_25350
Lipid biosynthesis proteins [BR:
rhjs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OYT95_25350
Exosome [BR:
rhjs04147
]
Exosomal proteins
Exosomal proteins of breast milk
OYT95_25350
Exosomal proteins of breast cancer cells
OYT95_25350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WAM12754
LinkDB
All DBs
Position
complement(5611695..5613404)
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AA seq
569 aa
AA seq
DB search
MPTSPSSDPTALESALAEIRELQDAAWPPQVPRTVEYPIEGRTVIDYLRHWASERPQTVA
IDFYGRAITYAELDELSDRFAGWLRRRGAAAGDRVGVHLTNCPQFHVAMLGILKIGAVHA
PINPLFREHELAYELVDAGVEILLTQNSFADMVDSVRDQTALRHVAVTALSDMLPDEPSV
APPFPHASAVTDWAEIMNTPRAEPIPMDPDALAALNYTGGTTGMPKGCEHTQAHMVYTAA
TATLAGGRQVGEAPPVVLGFLPIFWIAGEDFGILYPLINGGTVVLLNRWDPDAAATLVES
RGVTSMVGTVDNFVELMDLPGFRDRDFSTLDNAMAVSFVLKLDPAIRGRWRDATGHVLRE
ASYGMTETHTADTITLGFQTGDEDLLSQPVFCGLPVPGTDVLIVDEAGAPVPVGQPGQII
VRSPSLLTGYYGKPDATAAALRDGWLQTGDVGKLNGKGALHYLARNKEMIKTNGMSVFPS
EVEALLLLHPDIQSAAVVPKPDLGKGQVPFAFVQLLPDRQVSAEELREWAARNMATYKVP
TVEVLDALPMTATGKVRKADLFALAEEYK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcccacttcgccttcgagcgaccccacggcactggaatcggccctcgccgagatacgc
gaactccaggacgccgcgtggccaccgcaggtaccgcggacggtcgagtacccgatcgag
ggccgcaccgtgatcgactacctgcggcactgggcatcggagcgaccgcagaccgtcgcg
atcgacttctacggtcgtgccatcacgtacgccgaactcgacgaactgtccgaccgcttc
gccggctggctccggaggcggggcgcggccgccggcgaccgcgtcggcgtccatctcacc
aactgtccgcagttccatgtcgccatgctcgggatcctgaagatcggcgccgtccacgcc
ccgatcaacccgttgttccgggagcacgaactcgcatacgaactcgtggacgccggtgtg
gagatcctgctgacccagaattctttcgcggacatggtcgactccgtgcgcgaccagacg
gcgctgcggcacgtcgcggtcacggcgctgtcggacatgctgccggacgaacccagcgtg
gcaccacctttcccccacgcctccgcagtcaccgactgggcggagatcatgaacacccca
cgcgccgagccgattccgatggatcccgacgcgctggcggcactgaactacaccgggggc
accaccgggatgccgaagggctgcgaacacacgcaggcgcacatggtctacaccgccgcc
accgcgacgctggcaggcggcaggcaggtgggcgaggctcccccggtggtcctcggattc
ctgcccatcttctggatcgccggcgaggacttcggcatcctgtatccgctgatcaacggc
ggcaccgtcgtgctcctcaaccgctgggacccggacgccgcggcgacgctcgtcgaaagt
cgtggggtgacgtcgatggtggggacggtcgacaactttgtggaactgatggacctgccc
ggcttccgcgacagagacttctccaccctcgacaacgcgatggccgtgtcgttcgtgctc
aaactcgaccccgcgattcgcgggcgctggcgcgacgccaccggtcacgtgctgcgggaa
gcgagctacggtatgacggagacgcacaccgcagacaccatcacgctcggtttccagacc
ggcgacgaagacctgctcagccaacccgtgttctgcggactcccggttccgggcaccgac
gtgttgatcgtcgacgaggccggtgcgcccgtgccggtggggcaacccggacagatcatc
gtccgcagtccgtctctgctcaccggttactacggcaaacccgatgccaccgccgccgcg
ctccgcgacggctggctccagaccggcgatgtcggcaagctgaacggcaaaggcgcactg
cactatctggcgcgcaacaaggaaatgatcaagaccaacggaatgagcgtgttcccctcc
gaggtggaggcactgctcctgctgcatcccgacatccagtcggccgcggtcgtcccgaag
cccgatctgggcaagggtcaggtgccgttcgccttcgtccagctcctgcccgaccgccag
gtttccgcagaggaactgcgggagtgggcggcccggaacatggccacctacaaggtcccc
accgtcgaggtcctcgacgccctgcccatgacggcgaccgggaaggtccgcaaggccgac
ctgttcgctctggccgaggagtacaagtga
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