Rhodococcus sp. JS3073: OYT95_29565
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Entry
OYT95_29565 CDS
T10731
Name
(GenBank) TerD family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhjs Rhodococcus sp. JS3073
Pathway
rhjs03030
DNA replication
rhjs03430
Mismatch repair
rhjs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OYT95_29565
03430 Mismatch repair
OYT95_29565
03440 Homologous recombination
OYT95_29565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhjs03032
]
OYT95_29565
03400 DNA repair and recombination proteins [BR:
rhjs03400
]
OYT95_29565
Enzymes [BR:
rhjs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OYT95_29565
DNA replication proteins [BR:
rhjs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OYT95_29565
DNA repair and recombination proteins [BR:
rhjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OYT95_29565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
PTCB-BRCT
Rv2179c-like
DNA_pol_A_exo1
Tautomerase
PGM_PMM_I
Motif
Other DBs
NCBI-ProteinID:
WAM18823
LinkDB
All DBs
Position
6513009..6514784
Genome browser
AA seq
591 aa
AA seq
DB search
MTRPVRLPTGHRWVVVDVETSGLRSSTHRVLSVAALALREDGSVERELVTLLNPGCDPGP
VHIHNLTAQRLAGAPRFEEVAKDLLELLDGRTLVAHNASFDYGFLDAEVRRAGMTMPTRQ
RLCTLALSRRLEIDVPNHKLSTLAAHWKVRQNRAHDAYDDALVLTEVFAHSASLAESLRL
PLPVVGCADRRAVYPDRVPRVESPWRNPGRLDPGVGLVQGMKLVISGSTDVPRLALAERL
TDAGLDVMNSVSRQTSVVVCNDPHSSSAKVRRAVADEIPVLTERQLGKLLLHVTPGEPKA
AAAPSEVQQPRPATTIAPTKPWHGRRVLIVGGSHSDSVLMRSRIVQLGAKPSVNLSAGVT
DVLVLDGGELDPRMDRVSARQLPLLTAADVNSALEPAAPPERGAPLEPIRPPSQWVAPLL
ARGEVIDLPPQTASLTVNASWRAHTADDAFDVDVVALLLGEDGRVGCDEDFLFYNSPTSS
DGTVELSCDGSSEQGVRIELAALHSDYQCVSVSAAIGGDRTFGELGPISVTVDAPDHTIA
SFVLDAGTTERTMHFAEIYRRAGRWRLRAVGQGYEYDLATLATEYGVTVDD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgacccggccggtgcgattgccgacgggacaccgctgggtagtcgtggacgtcgagacc
tccggtctgcgttcgtccacgcacagagtgctcagcgtcgcggcgttggcgttgcgtgaa
gacggttcggtggagcgcgaattggtgacgctactcaacccgggctgcgacccgggaccg
gtccatatccacaatctcacggcgcagcgtctggcgggggctcctcgtttcgaagaggtc
gcgaaagatctgctcgagcttctcgacggtcggaccctggtcgcgcacaacgcgtcattc
gattacggcttcctcgacgccgaggtgcgacgggcagggatgacgatgccgacacggcag
aggctctgcacccttgccctgtcccgccgcctcgagatcgacgtccccaaccacaagttg
tccactctggccgctcactggaaggttcgtcagaaccgggctcacgacgcctacgacgac
gccctcgtgctgacggaggtcttcgcgcacagcgcctcgctggccgagtcactcagactt
cctctgccggtcgtcggctgcgccgatcggcgagcggtgtaccccgatcgggttccgcgc
gtggagtctccgtggcggaatccggggcggctggatccgggggtaggactggtccagggc
atgaaactggtcatcagcggcagcacggatgttccccgtcttgcactcgccgaacgtctg
accgacgccggcctggacgtcatgaattcggtcagccgtcagacgagtgtcgtcgtctgc
aacgacccgcactcgtcgagtgcgaaggtgcgccgcgcggtggctgacgaaattcctgtc
ctgaccgagcggcagctcggcaagttgttgctgcacgtgacaccgggtgagccgaaggcg
gccgcggcaccctccgaagttcagcagcctcgacctgcgacaacgatcgctcccacgaag
ccttggcacggcagaagagtgctgatcgtcggtggctcgcattcggactccgttctgatg
cgctcccgcatcgtgcaactgggcgccaagccgtcggtcaacctctccgcgggagtcacc
gatgtcctcgttctcgacggtggcgaactcgatccccgcatggaccgagtgtcggctcga
cagctgccgctgctcaccgccgccgatgtgaactccgcactcgaaccggcggcaccaccc
gagcggggggcgcccctcgagccgatccggccgccgtcccaatgggttgcgccgttgctc
gctcgcggagaggtgatcgacctgccaccacagacggcatcgctgacggtcaacgcgtct
tggcgcgcccacaccgcggacgatgcgttcgacgtggatgtggttgctcttcttctcggc
gaagacggccgggtcggctgcgacgaggactttctcttctacaactcgccgacgagttcg
gacggcaccgtggaattgtcctgcgacggcagcagcgagcagggagtgcggatcgaattg
gctgccctgcactccgactaccagtgcgtgtccgtatcggcggcgatcggcggcgatcgg
accttcggtgaactcggtccgatctcggtgaccgtggacgctccggaccacacaatcgca
tcgttcgtactggacgccggcacgacggaacggacgatgcatttcgccgagatctatcga
cgcgccgggcggtggcgtctccgggcggtgggtcaggggtacgaatacgatctcgcgacg
ctcgccaccgagtacggggtgacggtcgacgactga
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