Rhodococcus sp. JS3073: OYT95_32270
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Entry
OYT95_32270 CDS
T10731
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhjs Rhodococcus sp. JS3073
Pathway
rhjs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhjs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OYT95_32270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhjs03019
]
OYT95_32270
03400 DNA repair and recombination proteins [BR:
rhjs03400
]
OYT95_32270
Enzymes [BR:
rhjs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OYT95_32270
Messenger RNA biogenesis [BR:
rhjs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OYT95_32270
DNA repair and recombination proteins [BR:
rhjs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OYT95_32270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
HEM4
Pribosyltran
KORA
Motif
Other DBs
NCBI-ProteinID:
WAM14056
LinkDB
All DBs
Position
complement(7086146..7088245)
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AA seq
699 aa
AA seq
DB search
MTTATEPALRDEAERLLRELAGEHATLRDDQWTAIEALVVGRRRALVVQRTGWGKSAVYF
IAAKLLRAHGHGPTVIVSPLLALMRNQVASAERAGVRAATINSGNVTEWDDIHARVADNE
LDVLLVSPERLNNPDFRDQVLPSLAADAGLVVVDEAHCVSDWGHDFRPDYRRIRTLIAEL
GEGIPVLATTATANDRVVSDVSTQLGVGGAETLVLRGGLERESLHLSVVQIPEATARAAW
LAQKLDSLPGSGIIYALTVSAARDLASLLSEQGHTVAAYTGQTDAAERETLEQDLLGNRV
KALVATSALGMGFDKPDLGFVVHLGAPSSPISYYQQVGRAGRSTDRAEVILLPGSEDKQI
WSYFASVAFPREHVVRRVIEVLDTDRPQSTQALEPLVELGRTRLEMVLKVLDVDGAVRRV
RGGWVGTGEPWTYDADRYERLERARESEQQAMIDYQRITTCRMAFLREQLDDPGLAAGTS
ECGRCDNCTGVRHDATVDAEAVQQTRTRLERPGVDLAPRKQWPTGLAKLGVTLSGKITDG
PEPGRVLGRLSDLGWGQRLRSLLDEPDGPAPDAVLKACIQVLASWDWAERPTAVMAVESA
THPLLSASIAGQLAAVGRLSDLGVLRLRPEHPPVSAANSAYRVAGLVGAWEVPDLRDASG
PVLLVDTLTDTGWTLTMAARTLRAAGAASVLPFALASLK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgccaccgaacccgcactccgtgacgaggccgaacggctgctccgcgagctg
gcaggcgagcacgccaccctccgcgacgaccagtggacggcgatcgaggcgctcgtggtg
ggccgcagacgggcgctggtcgtccagcggacgggctggggcaagtcggctgtctacttc
atcgcggcaaagctcctgcgggcgcacgggcacggccccacggtcatcgtgtcgccgctc
ctggcactcatgcggaaccaggtggcctccgccgagcgggcaggcgtgcgcgccgccacc
atcaattccggcaacgtcaccgagtgggacgacattcacgcccgggtcgcggacaacgaa
ctcgacgttctgctggtcagccccgagcgtctcaacaatcccgacttccgcgaccaggtc
ctgccctccctcgcagccgacgcgggtctcgtcgtggtcgacgaggcgcactgcgtgtcg
gactggggtcacgacttccgtcccgactaccggcggatccgcacgttgatcgccgaactg
ggcgagggcatccccgtactggccaccaccgccacggcgaacgaccgcgtcgtctccgac
gtctcgacgcagctcggggtgggtggcgccgaaaccctcgtcctccgcggcggcctcgaa
cgcgagtcgctgcacctgtcggtcgtgcagattccggaggccaccgcccgggccgcgtgg
ctcgcccagaagctcgacagcctgcccggctcgggcatcatctacgcgctcaccgtgtcg
gcggcgcgggatctggcgagcctgctgtccgagcagggccacacggtcgccgcctacacg
gggcaaaccgacgccgccgagcgcgagaccctcgagcaggacctgctcggcaaccgcgta
aaggccctcgtggcgacgtccgcgctcggcatggggttcgacaagcccgacctggggttc
gtcgtgcacctcggtgcgccgtcgtcccccatctcctactaccagcaggtcgggcgtgcc
ggacggtccaccgaccgcgccgaggtcatcctgctgcccggctccgaggacaagcagatc
tggagctatttcgcctcagtggcgttcccccgggagcacgtcgtgcgccgggtcatcgag
gtcctcgacaccgaccggccgcagtccacgcaggcgctcgagccgctggtggagctgggc
cgcacccggctggagatggtcctgaaagtcctcgacgtggacggtgcggtacgccgggtg
cgcggcggctgggtgggcaccggggagccctggacgtacgacgcggaccgctacgagcgc
ctggagcgggcccgcgagtccgaacagcaggcgatgatcgactaccagcggatcaccacg
tgccggatggcgttcctgcgcgagcagctcgacgatccgggtctggcggcgggaacctcg
gagtgcggccggtgcgacaactgcaccggagtgcgccacgacgcgaccgtggacgccgag
gcggtacaacagaccaggacgcgcctcgagcggccaggcgtggatctcgcgccccgtaaa
cagtggcccacgggcctcgcgaagctcggcgtgacgctgtccgggaagatcacggacggc
cccgaaccggggcgcgtcctgggccggctgtccgacctgggctggggtcagcggctgcgg
tccctgctcgacgaaccggacggacctgcccccgacgccgtcctgaaggcctgcatccag
gtgctggcctcctgggactgggccgagcgtcccaccgccgtcatggcggtcgaatccgcc
acccatccccttctgtcggcgtcgatcgcggggcagctcgccgctgtcggacgactctcc
gacctgggagttctgcggctgcgaccggagcatccgccggtatccgcggccaattccgcg
taccgggtggccgggctcgtcggcgcctgggaggttcccgaccttcgcgacgcatccgga
ccggtgctgctcgtcgacacactcacggacaccggctggaccctcacgatggccgccagg
acgctccgcgcggcgggtgccgcgtcggtcctccccttcgcgctcgcgagtctcaaatag
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