Rhodococcus sp. JS3073: OYT95_33205
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Entry
OYT95_33205 CDS
T10731
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhjs Rhodococcus sp. JS3073
Pathway
rhjs03030
DNA replication
rhjs03430
Mismatch repair
rhjs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OYT95_33205
03430 Mismatch repair
OYT95_33205
03440 Homologous recombination
OYT95_33205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhjs03032
]
OYT95_33205
03400 DNA repair and recombination proteins [BR:
rhjs03400
]
OYT95_33205
Enzymes [BR:
rhjs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OYT95_33205
DNA replication proteins [BR:
rhjs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OYT95_33205
DNA repair and recombination proteins [BR:
rhjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OYT95_33205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WAM14231
LinkDB
All DBs
Position
complement(7270094..7271860)
Genome browser
AA seq
588 aa
AA seq
DB search
MSVPGVPEQLRFDELDTPLRDTTFVVVDLETTGARPGEDAITEIGAVKIRGGEVIAEMAT
LVDPGRSIPPHIVEITGITTAMVIDAPRIERVLPAFLEFARGAVLVAHNAPFDTGFLKAA
ASATDTPWPKFTVLCTVKLARRVLSRDEAPSVKLSSLARLFDVGTTPTHRALDDARATVD
VLHALIARVGNQGVHSLTELVDYLPDVSSHQRAKRSLAGHLPHAPGVYLFRGPSDEVLYV
GTATDLRRRVRNYFTGSETRGRMKEMVALTTRIDHVECAHALEAGVRELRLLAAHTPPYN
RRSKYPKRGWWITLTAEAFPRLSVVRTPTADSLGPFRSRSTAVDVADVLAEYCILRTCTS
RIPKGREHGPHCPPRELGRCPASVHGRVTEDAYRPGPELFRQFLRGLDDSPLHRMRARVE
ELAAGELFENAARLRDRTAEVVLALRRMQRLAALTALDQLVAARPAATGGWEFAVIRSGR
LASAGCARRGIHPMPVVDALVLTAETVVPDATPLRGASPEEAGLLARWLDQEDTRIVSAS
SGWCEPARGAGSWSEWCALARAGSTSTRDAETRPPAPTSADHRLGWRS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtccccggtgtacccgaacagctgagattcgacgagctcgacaccccactgcgg
gacaccacgttcgtggtggtcgatctcgagaccaccggcgcgcgaccgggcgaggacgcc
atcaccgagatcggcgccgtgaagatccgcggcggcgaggtgatcgccgaaatggccacc
ctcgtcgacccgggacgatccatccccccgcacatcgtggagatcaccggcatcaccacc
gccatggtgatcgacgccccgcggatcgagcgagtgctgccggcgttcctggagttcgct
cgcggggcggtgctcgtcgcccacaacgccccgttcgacacgggcttcctcaaggccgcg
gcgtccgccaccgacaccccctggcccaagttcaccgtgctctgcaccgtcaaactggcc
cggcgcgtcctcagccgcgacgaggcgccgtccgtcaaactgtcgtcgctggcccggctg
ttcgacgtcgggaccactccgacgcaccgggcactcgacgacgcccgcgccaccgtcgac
gtcctgcacgccctcatcgcgagggtcggcaatcagggagtgcacagtctcaccgagctg
gtcgactacctgcccgacgtctcctcgcaccagcgggcgaaacgctcgctcgccggccac
ctcccgcatgctcccggcgtctacctgttccgcggaccgtccgacgaggtcctctacgtc
ggcacggcgaccgatctgcgccgtcgggtgcgcaactacttcaccggctccgagacgcgt
ggccggatgaaggagatggtggccctgaccacccggatcgatcacgtcgagtgcgcgcac
gcgctcgaggccggtgtgcgcgagctccggctgctcgcggcgcacacgccgccgtacaac
cggagatccaagtacccgaaacgcggttggtggatcacgctcaccgcggaggccttcccc
cggctgtcggtggtgcggaccccgaccgccgactcgctcggtccgttccggtcccgctcg
accgcagtcgacgtcgccgacgtcctcgccgagtactgcattctccgcacctgcacgagc
cgcatcccgaagggaagggagcacggtccgcactgcccgccccgcgagctcggacgctgc
ccggcgtccgtccacggccgcgtcacggaggacgcctaccgtcccgggccggaactcttc
cggcaattcctgcgcggcctggacgactctccgctgcaccgcatgcgcgcacgggtggag
gagctggccgccggcgagctgttcgagaatgccgcacgcctgcgtgatcgcaccgcggag
gtcgtgctcgcgttgcggaggatgcagcgcctggctgccctcaccgccctcgatcagctc
gtcgctgctcgcccggccgcgaccggcggctgggagttcgcggtgatccgttccggccgc
ctcgcgtcggccggctgcgcgcggcgcgggatccacccgatgccggtggtcgatgcgctc
gtcctcaccgccgaaaccgtcgttcccgacgcaactccgcttcgcggtgcctcccccgag
gaggccgggttgctggcgcgctggctcgaccaggaggacacccgcatcgtcagcgcttcc
tcgggctggtgcgagcccgcccggggcgccggatcctggtccgagtggtgcgcactcgcg
cgagcggggagcacgtcgacacgggacgccgagacccgaccacccgcgccgacttccgcc
gaccaccgcttaggctggcgatcatga
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