Rhodococcus sp. JS3073: OYT95_33385
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Entry
OYT95_33385 CDS
T10731
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rhjs Rhodococcus sp. JS3073
Pathway
rhjs00470
D-Amino acid metabolism
rhjs00550
Peptidoglycan biosynthesis
rhjs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhjs00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OYT95_33385 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OYT95_33385 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhjs01011
]
OYT95_33385 (murD)
Enzymes [BR:
rhjs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
OYT95_33385 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhjs01011
]
Precursor biosynthesis
Amino acid ligase
OYT95_33385 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
AlaDh_PNT_C
MurD-like_N
2-Hacid_dh_C
NAD_binding_7
AdoHcyase_NAD
Motif
Other DBs
NCBI-ProteinID:
WAM14264
LinkDB
All DBs
Position
7311295..7312794
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AA seq
499 aa
AA seq
DB search
MAEEHGGLDWLRGRSVLVAGAGVSGRATIEPLRDLGALVTVTDANVDALAECARLGAATV
PIDDLLAERDRVAEFALVVTSPGFRPDAPLLSLAAGDGVPIWGDIEFSWHVDRAGLYGPP
RRWLVVTGTNGKTTTTSMLQSVLEAAELPSLACGNIGLPVLDALRRTEPRAEVLAVELSS
FQLHWAPSVRPTAGAILNIAEDHLDWHGGMQPYIDAKARALTGEVAVLGLDDEVASSLFS
SSLAVRTLGFRLGVPAPGELGVEDGYLVDRAFADRERLAPAAGITPPGPAGLMDALAAAA
LARAIGVPPDAVAAGLAAHVVGPHRAAHVAEVGGVTFVDDSKATNPHAARPSILAHERVV
WIAGGLLKGARVDDLVREVAGRLAGAVLLGRDAMQIAESLARHAPEVPVVTVETGDDAGV
SAVPQTATHRVVLPADTDSDAVMGVVVREAAALATAGDSVVLAPAAASLDMFDSYGHRGR
SFADAVGGLDESDISRTLR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaggaacacggcgggctcgactggttgcggggtcgcagcgtcctcgtcgccggt
gcgggtgtctccggccgggccaccatcgaacctcttcgtgacctcggtgcgctcgtcacc
gtcaccgacgcgaacgtcgacgctctcgccgagtgcgcgcggctcggcgccgcgaccgtc
ccgatcgacgatctgctcgccgagcgggaccgggtcgccgagttcgcgctggtcgtgacg
agcccggggttccgcccggacgcgccgctgctctcgctcgccgccggggacggggtgccg
atctggggcgacatcgagttctcctggcacgtggaccgggccgggctctacggcccgccc
cggcggtggctggtggtcaccggcaccaacggcaagaccacgacgacctccatgctgcag
tccgtcctcgaggcggccgagttgccgagtctggcctgcggcaacatcgggttgccggta
ctcgacgccctgcggcggaccgaaccccgggcggaggtgctggctgtcgaactctcgtcg
ttccagctgcactgggcgccgtcggtccggccgactgcaggcgcgatcctcaacatcgcc
gaagatcatctggactggcacggcgggatgcagccgtacatcgatgcgaaggcccgcgcc
ctgaccggtgaggtcgcggtactgggcctcgacgacgaggtcgcgtcctctctcttctcc
tcgtccctcgccgtccggaccctgggtttccggctgggtgtgcctgcgccgggcgaactg
ggtgtcgaggacgggtatctcgtcgaccgcgcgttcgcggatcgtgagcggctggccccg
gccgcggggatcaccccgcccgggcctgccggactgatggatgccctggccgcggcagct
ttggcccgggcgatcggagttccgccggacgccgtcgccgcgggcctggccgcccacgtc
gtgggcccgcaccgtgcggcacacgtcgccgaggtcgggggggtgacgttcgtcgacgac
tccaaggccaccaacccgcatgctgctcgcccgtcgatcctcgcccacgagcgggtggtg
tggatcgccggtggtctgctgaagggtgcgcgggtggacgacctcgttcgggaggtggcc
ggtcgtctcgccggcgccgtcctgctgggccgcgatgcgatgcagatcgcagagtccctt
gcgcgacacgcccccgaggttcccgtggtcactgtcgaaacgggagacgatgcaggtgtg
agtgcagtcccgcagaccgcgacgcaccgggtggtgctgccggcggacaccgacagcgac
gccgtgatgggtgtcgtcgtgcgcgaagcggctgcgctggcaacggcaggggattccgtg
gtcctggcgcccgcggcggcctcgctcgacatgttcgacagttacggtcaccgggggcgc
agcttcgcggacgccgtcggcgggctcgacgagtcggacatctccaggacgctgcgatga
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