Rhodococcus sp. JS3073: OYT95_33905
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Entry
OYT95_33905 CDS
T10731
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhjs Rhodococcus sp. JS3073
Pathway
rhjs03030
DNA replication
rhjs03410
Base excision repair
rhjs03420
Nucleotide excision repair
rhjs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OYT95_33905 (polA)
03410 Base excision repair
OYT95_33905 (polA)
03420 Nucleotide excision repair
OYT95_33905 (polA)
03440 Homologous recombination
OYT95_33905 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhjs03032
]
OYT95_33905 (polA)
03400 DNA repair and recombination proteins [BR:
rhjs03400
]
OYT95_33905 (polA)
Enzymes [BR:
rhjs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OYT95_33905 (polA)
DNA replication proteins [BR:
rhjs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OYT95_33905 (polA)
DNA repair and recombination proteins [BR:
rhjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OYT95_33905 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OYT95_33905 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
WAM14365
LinkDB
All DBs
Position
7419308..7422052
Genome browser
AA seq
914 aa
AA seq
DB search
MSPATTPRSTTSPTSGAAASSDDRPTLMLLDGHSLAFRAFYALPAENFKTHSGQVTNAVY
GFTSMLINLLRDEQPSHVAAAFDVSRQTFRAEKFPEYKANRSKAPDEFKGQVEITKDVLG
ALGIPVMAEEGFEADDIIATLTTQAEALGYRVLVVTGDRDSLQLVTDGVTVLYPKKGVSD
LTRFTPAAVEEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIKEYGDLVGLVD
NVDKVRGKVGDALRENLPNVLLNRELTEMVRDVPLPYTPDQLMLAQWDREKIHALFDDLE
FKVLRDRLFATLAPVEAEAEEGFEVRGGALDPGAVADWLAAHASTGERSGVSVVGTRTPY
GGDVTAIALATADGEGAYIATASATPEDEKALGDWLADADQPKALHEAKWAMHALRGRGW
VLGGLTSDTALAAYLVRPGQRTFNLDDLSLRYLRRELRVEETGQEQLSLLDDADQVDAEA
AETEILSARAVLDLAAALDTELDNIESTALLSEMELPLLEVLAVIEASGIAVDGTHLHDL
QSRFAAEVSEAAEAAYGVIGKQINLGSPKQLQVVLFDELEMPKTKKTKTGYTTDAEALQN
LFEKTSHPFLEHLLAHRDATRLKVTVDGLLKTVAEDGRIHTTFNQTVAATGRLSSTEPNL
QNIPVRTDAGRQIRDGFVVGEGYDSLLTADYSQIEMRIMAHVSGDEGLIEAFNTGEDLHS
FVGARAFGVPIEEVTPELRRRVKAMSYGLAYGLSAFGLAAQLKISTEEAKSQMEAYFARF
GGVRDYLHEVVEQARKDGYTSTLYGRRRYLPDLTSDNRQRREVAERAALNAPIQGTAADI
IKVAMINVQRSLREAGLKSRMLLQVHDELVLEVVDSEREQVEQLVRDKMSSAIELSVPLD
VSVGTGRSWDAAAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
gtgagccctgcaaccaccccccggtccaccacgtccccgacgtccggcgcagcagcgtcg
tccgacgatcgccccaccctgatgctgctcgatggccactcgctggcctttcgtgcgttc
tacgccctgcccgccgagaacttcaagacacacagcggtcaggtcaccaacgccgtctac
gggttcacgtcgatgttgatcaacctgctgcgcgacgaacagcccagccacgtggcggcg
gcgttcgacgtgtccaggcagacgttccgggcggagaagttccccgagtacaaggccaat
cgcagcaaggctccggacgagttcaagggtcaggtcgagatcaccaaggacgtcctcgga
gcgctcggtatcccggtgatggccgaggaaggcttcgaggccgacgacatcatcgccacg
ctcaccacccaggccgaggcgctcggctaccgcgtcctcgtggtgaccggcgaccgggac
tcgctccaactggtcaccgacggggtgacggtgctctacccgaagaagggcgtctcggac
ctcacccggttcacgccggcggccgtcgaggagaagtacgggctcacacctgcgcagtac
cccgacttcgcggcgctgcgcggcgacccgagcgacaacctgccgggcatcccgggggtg
ggggagaagaccgccaccaagtggatcaaggagtacggcgatctcgtcggcctggtcgac
aacgtcgacaaggtccgcggcaaggtcggtgacgcgctgcgggagaacctgccgaacgtc
ctgctcaaccgggaactgaccgagatggtgcgcgacgtcccgctgccgtacaccccggac
cagctgatgctcgcgcagtgggatcgggagaagatccacgcgctgttcgacgacctcgag
ttcaaggtgctgcgcgaccggctgttcgccacattggccccggtcgaagcggaggcagag
gagggcttcgaggtgcgcgggggcgcgctcgatcccggtgcggtcgcggactggctggcg
gcgcacgcgtcgacgggcgagcgttccggtgtttcggtggtcggcacccgcaccccgtac
ggcggtgacgtgacggcgatcgccctcgcgaccgccgacggcgagggcgcctatatcgcc
accgcttccgccaccccggaggacgagaaggcgctcggcgactggctcgcggacgcggat
cagccgaaggccctgcacgaggccaagtgggcgatgcacgcgctgcgcggacgcggctgg
gtgctcggtggtctcaccagcgacaccgcgctggcggcctacctggtgcgccccggccag
cggaccttcaacctcgacgacctgtcgttgcggtacctgcgcagggagctgcgggtggag
gagaccggccaggagcagctgtcgctgctcgacgacgccgaccaggtcgacgcggaagcc
gccgagaccgaaattctcagcgcccgcgccgtcctcgacctcgcggccgcgctcgacacc
gaactcgacaacatcgaatcgacggctctgctgtcggagatggagctgccgctgctggag
gtgctggccgtcatcgaggcgtccggtatcgccgtcgacggcacccacctgcacgacctg
cagagccggttcgcggccgaggtgtccgaggcggcggaggcggcctacggggtcatcggc
aagcagatcaacctcgggtcacccaagcagttgcaggtcgtgctgttcgacgagctggag
atgcccaagacgaagaagacgaagaccgggtacaccacggacgccgaggcgttgcagaac
ctgttcgagaagacgtcgcacccgttcctcgagcacctgctcgcgcaccgcgacgcgacg
cggctgaaggtgacggtcgacggcctgctgaagacggtcgccgaggacggccgcattcac
acgacgttcaaccagaccgtcgcggccaccggccggctgtcgtccaccgagcccaacctg
cagaacatcccggtgcgcacggatgcgggccggcagatccgggacggtttcgtcgtcggc
gagggctacgactccctgctcacggccgactacagccagatcgagatgcggatcatggcc
cacgtgtccggagacgaggggctgatcgaggcgttcaacaccggagaagacctgcacagc
ttcgtcggggcgcgcgcgttcggcgtgccgatcgaggaggtcacgccggagctgcgccgc
cgcgtgaaggcgatgtcctacgggctggcgtacgggctgagcgcgttcggtctggctgcg
cagctcaagatctcgaccgaggaggccaaatcgcagatggaggcgtacttcgcccggttc
ggcggggtacgcgactacctgcacgaggtcgtggaacaggcccgcaaggacggctacacg
tcgacgctgtacgggcgccgccgctaccttcccgacctcaccagcgacaaccgtcagcgt
cgcgaggtcgccgagcgcgccgcgctcaacgcccccatccagggcacggccgccgacatc
atcaaggtcgcgatgatcaacgtgcagcgctcactgcgcgaggcgggtctgaagtcgcgg
atgctgctccaggtccacgacgaactcgtgctcgaggtcgtcgattcggaacgggaacag
gtcgaacagctggtccgcgacaagatgtcctcggccatcgagctgtcggtgccgctggac
gtgtccgtcggcaccggccgcagttgggacgccgccgcacactag
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