Rhodococcus sp. JS3073: OYT95_40755 Help Entry OYT95_40755       CDS       T10731                                  Name (GenBank) TIR domain-containing protein Organism rhjs  Rhodococcus sp. JS3073 SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz nSTAND1 Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_SCAP eIF2A TIR_2 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Cytochrom_D1 AAA_16 Beta-prop_NOL10_N WDR54 PEP5_VPS11_N WD40_CFAP43 TIR Motif Other DBs NCBI-ProteinID:  WAM19967 LinkDB All DBs Position unnamed:626481..630734 Genome browser AA seq 1417 aa AA seqDB search MSRVFLSHSSRDSRAAIAVKRWLIEQEPGLAGEIFLDLDPHTGIRPGERWKQALQRASNR CEAVICLLSASWHSSRECTYEFRYAEALNKAIVCARLEPVPDTGITGDWQRCDLFGDGPT IEIVVDGGDPVVLTVDGLHRLLDGLRALGIGAEYFPWPPPADPERAPYRGWEPLDEADAA VFFGRDGQILRGLDAVRGMRVSGVESLLVILGPSGTGKSSFLRAGLLPRLRRDDRAFLPL NIVRPERAVLTGELGLAHSLYSLRAGLGLLQPQLGEIKAACLESDVDRLLAWFAEARQAA RARLLDAPPEAPAPTLILPLDQGEELFSADAGPQAPRFLQILAALLRQDAEAAPGLIVAV TIRADRYEPLQTAPELAAVQSVVFDELKSMPPAEFKEVITGPARRATEAGRRLTIEPALV DRLLKDSSEGADTLPLLALTLQRLYCDFGDDGNLTVAEYETMGGMPRVVQTEIDLLLNPD PAARKAQLDTLHDAFIPWLATINPDNDQPMRRLARGSDLPPASSTLIDAFVEKRLLVRDI RNGQPVFEVALESLLRQWRELAEWLQTESRNLKDADILERAAADWRTNHRHDAWLLEGER LSEFERLATHVGFEDRLRSTREYLSASRQREDARQKEEKRRQEIELQAARDREHAAQALA TEAQRHAVVLRKRSRALRIVLAVTAVIALVAVYGLVGAVQARNQAEERTNQATALRLISE AEQIVAGDRSGSDVQALQQVLAATELRERADGDALVNARIDGAAYDLVNGRRDQVRVIET PSPVDAVAVSPDSQQIASGSDNATVYLWNAGSGQQVGELHHEKYPVRGIAFSPNGKWIVT GGGDRNVRLWDAKTGDPIGAPMKHDEAVHSVDVSSDSRLIVSGGEDSTIRLWETSSGRPA IEPIRDGGGIVRSVAFNPAGDRIASGDEDGNLRVWDTSGRQVGEARTGTKVLSVAYNPAG DRIASGDLDGTIRIWDANGLPVDQTFATVGGVLNSIAFSPDGSQIISGGGASAVQIWDLA TRQEIGDPTIINSGAVMGVAFSPNSRQIVSGSRDGTVHVWDPIAATPIQTSQGSIHAVAY GPDGQQVASAGEDGTVRTWDAKSAKPISSPFGDPSGGENAVLSVSYSPDGKRLVSAGKDG AVRLWDVTTRQAVVLPMVPPVGAPPTRPPPPPTEPHWVQSVAFNDDGSRIVSGGSDGAIR LWEVTGRPIGAIYGHAGVVRSVAFSPNGQQIVSGSWDFSIKMWSANNLSSFGNPMTESGM YEVYGVAFSPDGHRIVSGSYDSALRVWDADSQQKVAEIEGDNNMVWSVAFAHDGRWIASG SDNEVRLWDADTYEAVGQPFVGAQGLVRSVSFSPDDRQIVSASWDGLLRFWATPSDVNGA LCGKLNSNMSRQQWDEWVSPSIDYAEVCRGLPIPPDE NT seq 4254 nt NT seq  +upstreamnt  +downstreamnt atgtcgcgcgtctttctgagtcattcgagccgggattcgcgagccgctatcgcggtgaaa aggtggctgatcgagcaggaaccgggtttggctggcgagatctttctggatttggatccg cacaccgggatccggccgggtgagcgttggaagcaggcgttgcagcgggcgagcaaccgc tgcgaggcggtgatatgcctgctctccgcgagctggcactcctcgcgtgaatgcacgtac gagttccggtacgcggaagcgttgaacaaggcgatcgtatgcgcccggctcgagccggtt ccggacactggtatcaccggcgactggcagcgttgcgacctgttcggcgatggccccacc atcgagattgtcgttgatggtggggacccggtggtactcacggtcgatggtctgcaccgg ttgcttgacgggctgcgtgcgttggggatcggagcagagtattttccgtggccgccgccg gcggacccggaacgggctccgtaccggggttgggaaccactagatgaggccgatgctgcg gtctttttcgggagggacggtcagattctgcgcggattggacgcggtacggggtatgcgc gtttccggtgtggagtcgttgctggtaattctaggcccctcgggaactggaaagtcgtcg tttctgcgggccggtttgctaccccggctgcgtcgcgacgaccgcgcgttcttgccgctg aacatcgtgcgccccgaacgggccgtactcaccggcgagctcgggctcgcccattccctc tatagtcttcgcgccggcctggggctgttacagccgcagttgggggagatcaaggctgcc tgcctcgaatccgacgtcgaccggctgcttgcgtggttcgccgaagcccgacaggcggca cgcgcccgtctgctcgatgcgcccccggaagcaccggcgccgacgctgatcttgccgctc gaccagggtgaggaactctttagcgccgatgcgggaccgcaagccccacgattcctgcag atcctggcagcactattacgccaagacgccgaggctgcccccgggttgattgttgcggtt accatccgcgccgaccgctacgagccgctacaaacagcaccggagttggccgcggtacaa agtgtggtgttcgacgaactcaagtcgatgccaccggccgagttcaaggaggtcatcacc ggcccggcccggcgcgcgaccgaggccggacgaagattgacaatcgaaccagcgctggtc gaccgcctgctgaaagacagttccgagggggcggacaccctgccgctgctggccctcacc ttgcagcgtctctactgtgacttcggcgatgacgggaatctgaccgtggccgagtacgag acgatgggtggaatgccacgagtggtgcagaccgagatcgacctcctgctcaatcccgac cctgctgcccggaaggctcaactcgacaccttgcacgatgcgttcatcccgtggctggcc acaatcaacccagacaacgaccaaccgatgagacgcctcgcccgcgggtccgacctgccg ccggctagctccaccctgatcgacgcgttcgtcgagaaacggttgctggtcagggatatt cgcaacggacagcctgtgttcgaggtcgccttggaaagtttgcttcgtcaatggcgtgaa cttgccgaatggctacaaaccgaaagccggaacctaaaggacgctgacatcctcgagcgt gccgccgcggactggcgaacgaaccatcgccatgatgcgtggctactcgaaggggaacgt cttagcgaattcgagagactcgcaactcatgtgggtttcgaggacagattgagatcgacg cgcgagtaccttagcgcgtcgcgacagcgtgaagatgcgcggcaaaaagaggaaaaacgt cgacaagagattgagctgcaggccgcgcgggaccgggagcatgccgcccaagccctcgcc accgaggcgcaacgccacgcggtggttctccgcaagcgatcacgagcgttgagaattgta ctggcggtcactgcggtaattgcgttggtcgccgtgtatgggttggtaggcgctgtacag gctaggaaccaagcagaggagcgcacaaaccaggcaaccgctctgcggttgatttccgag gccgagcagattgtcgccggtgatcggtcgggaagtgatgttcaggcactgcaacaagtt ctcgcagccacggagctgcgagagagggcagatggcgatgctcttgtgaatgctcggatc gacggcgcagcatatgacctggtgaatggacggcgtgaccaagtccgggtcatcgagact ccttcacccgttgatgcagtggctgtaagccccgatagtcaacagatcgcctcgggcagc gacaacgccactgtgtacctctggaatgctggcagcggtcagcaggtaggtgagctgcac cacgagaagtacccggtgcgcggcattgcatttagcccgaacggcaagtggattgtaacc ggcggcggggaccggaacgtgcggctgtgggatgccaagactggcgatccgatcggggcg ccgatgaagcacgatgaggcggtacatagcgtcgacgtcagcagtgacagtcggctcatt gtctccggcggagaggattccacaattcggctgtgggagacgtcgagcggccgaccggct atcgaaccgatcagggacggcggaggaattgtccgaagcgtcgcattcaaccccgccggt gatcgcatcgcttccggtgatgaagacggcaatcttcgggtctgggacaccagcggtcgg caggtcggtgaggcacggaccggcacgaaggtgttgagcgtcgcgtacaatcctgccggc gatcgcatcgcctccggcgacctcgacggcactattcggatatgggatgcgaacggcctt ccagtggaccagacgtttgcaacggtaggcggcgtgctgaacagcatcgcgttcagcccc gatggaagccaaatcatctccggcggtggcgccagcgcagttcagatatgggacctagca acgcgccaagagattggggatccgacaatcatcaacagtggtgcggtgatgggcgtcgcg ttcagcccgaacagccgccagatcgtgtcaggcagtagggacggtacggtgcacgtatgg gatccgatcgccgccacaccgatccagacgagccagggctcgatccacgctgtcgcctac ggtccggatggtcagcaagtcgcttcggccggcgaggacggcacggtgcgaacgtgggat gcgaagtccgccaaaccgattagttcaccattcggggatccgagtggtggcgagaacgca gtactcagcgtctcttacagcccggatgggaagcgtctcgtctccgccggaaaagatggt gcagtgaggttgtgggacgtgactacccgccaagcagtggtgttgccgatggtcccccca gttggcgcaccgccgacgcgcccaccgccgccgcccaccgaaccgcactgggtgcaaagt gtcgcgttcaatgacgacggttcccggatcgtgtcgggcggcagcgacggcgcaatacgt ctgtgggaggtaaccggccggccgatcggtgcgatatacggacatgcgggggtagtcagg agtgttgcattcagtccgaacggccaacagatagtttccggtagctgggatttctctatc aaaatgtggagtgccaacaacctatcctcattcggcaatccaatgactgagtcagggatg tatgaggtatatggcgtcgctttcagtcccgacggccatcgcattgtctccgggagctat gactcagcactccgcgtgtgggatgcagacagccagcagaaggtcgctgaaatcgagggt gataacaatatggtgtggagcgtcgccttcgcacacgacggccggtggattgcatcgggg agtgacaatgaagtgcggctctgggatgccgacacctacgaggcggtgggtcagccgttt gtgggcgctcaaggtttggtccgaagtgtctcgtttagccccgacgatcgacagattgtt tctgcgagttgggacggactcctgcgattctgggcgacaccatcagatgtcaatggagct ctgtgtgggaagctcaatagcaatatgagccgccagcagtgggacgaatgggtctctccg agcattgactatgcagaggtttgtcgcggtctaccaatcccgcccgacgaatga

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