Rhizobium sp. Kim5: Kim5_CH00006
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Entry
Kim5_CH00006 CDS
T05501
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk03030
DNA replication
rhk03430
Mismatch repair
rhk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Kim5_CH00006 (dnaQ)
03430 Mismatch repair
Kim5_CH00006 (dnaQ)
03440 Homologous recombination
Kim5_CH00006 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhk03032
]
Kim5_CH00006 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rhk03400
]
Kim5_CH00006 (dnaQ)
Enzymes [BR:
rhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Kim5_CH00006 (dnaQ)
DNA replication proteins [BR:
rhk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Kim5_CH00006 (dnaQ)
DNA repair and recombination proteins [BR:
rhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Kim5_CH00006 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ARQ56141
LinkDB
All DBs
Position
3333..4049
Genome browser
AA seq
238 aa
AA seq
DB search
MREIIFDTETTGLDNRMDRIIEIGGIELFNHFPTGNTLHIYINPGDQKVHPDALAVHGIT
DEFLKDKKAFAEVAEEILAFFGDAKWIAHNATFDMGFINAEFARIGLPPILPERVVDTLS
MARRKNPMGPNSLDALCRRYGVDNSHRAKHGALLDSELLAEVYIEMIGGRQAALGLGQSG
QAAGGEMAMEDDGAILAVLERPRPLAPRLSQAEAQAHEALVAKLGEKGIWSKFASSPA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcattttcgatacggaaaccaccggccttgacaaccggatggaccgcatc
atcgaaatcggcggcatcgaactcttcaatcacttcccgaccggcaacacccttcatatc
tacatcaatccgggagatcagaaggtccatccggatgcgctcgccgtgcacggcattacg
gatgaattcctcaaggacaagaaagccttcgccgaggtcgccgaggaaattctcgccttt
ttcggcgatgccaagtggatcgcccacaacgccactttcgacatgggcttcatcaacgcc
gaattcgcgcggatcggtttgccgccgatcctgccggaacgggtggtcgatacgctgtcc
atggcgcggcggaaaaatccgatgggaccaaattcgctcgacgcactttgccggcgttac
ggcgtcgacaattcgcaccgcgccaaacacggcgcgcttctcgactccgagctgctggcc
gaagtctatatcgaaatgatcggcggcaggcaggcggcccttggcctcggacaatccggc
caggcggcgggcggcgaaatggcgatggaagatgatggagcgatattagcggtgcttgag
cggccccggccgcttgcaccccgcctcagccaggccgaagcgcaggcgcatgaggcgctg
gtcgccaagctcggcgaaaaaggcatctggtcgaaattcgccagctcgccagcgtga
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