Rhizobium sp. Kim5: Kim5_CH00027
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Entry
Kim5_CH00027 CDS
T05501
Name
(GenBank) double-strand break repair helicase AddB type protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhk03400
]
Kim5_CH00027
Enzymes [BR:
rhk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Kim5_CH00027
DNA repair and recombination proteins [BR:
rhk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Kim5_CH00027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ARQ56162
LinkDB
All DBs
Position
complement(24928..28122)
Genome browser
AA seq
1064 aa
AA seq
DB search
MTERHQPRILTIPAGLPFLKTLATTLCDGRLTPLFRHNVDDPLSLAGVTIYLPTRRAVRV
LRSAFVDLLGGRSAILPVIRPLGETDDDSGYFDEVLPTTIDLAQPLSNTARLLELARLIL
AWRNKLPEIVRHIHSDSPLVAPASPADAIWLARNLAELIDSIETEDLDWSELSKLDTGDY
AAWWQLTAEFLQIASAFWPARLSELGKSSPARHRNAILRAEAAQLSATKPGGPIIIAGST
GSVPATADLIAAVAHLSEGVIVLPGLDLAMPEGHWQMVAPEPAPGQHLNPASRSHPQYGL
SSLLKRLRLTRADVSILDRPEADLDRRAEILSRALAPAEATSDWGTWKSELPGGALTSAF
NDVSLIEAANEREEATAIAVALRLALERPGQDGESRAALITPDRNLARRVMAELSRFGIL
ADDSAGTPLSATPQGSLLQLLLEAALRPGDPVAIVSLLKHPLARFGLERDALISATETLE
LLALRGGVTEVDISALEVLLTHQLAEQALDRHAPQWRKALPADAANLASELARRITQATE
PLASALFRHRPEDRGKTASFTLSEWAARTGRALEAVAADPQGNLADLWSNEAGDALASLL
GEVIDTDGQMEADGPQWIDIMAALAAGHAVKPRALSHPRLFIFGTLEARLQSVDTLILGG
LNEGSWPGQSANNPFIPRMMKTEIGLEPPERRIGQLAHDFEMANGTRHLIYSRALRQGST
PTVASRWLQRLLALGGEALEAELKGRGSRFLQWAGLIDRGESQAPAQRPSPKPPLALQPK
SYSFSEVGRLRRDPYAIYARRILRLDPVDAFNRDPGAAERGTLYHTIIDRFIRAAHVAGT
PEAAAAMELILTELFDMEKLPPHIDAVWRPRFREVARAFLEWEAGRRPAIRRTLTEVRGG
VELEAINIRLNGVADRIDITGPNAADIIDYKTGYNPSPAQARALLDPQLALEAAALRAGA
FRDAGSLTPQDLLYVRLRPGNRFQVDMVNNENAARSDKAKSAIDLAEESVDQLIKFVSLL
QSGEKGFTSRLIPAQQFDFGGDYDHLARVSEWSTAENEEGGGDE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcggcaccagccacgcatcctgacgatcccggccggccttcccttcctgaaa
accctggcgacgacactgtgcgacggccgattgacgccgctcttccggcataatgtcgac
gacccgctgtcgctcgccggagtaaccatctacctgccgacgcggcgcgccgtgcgtgtg
ctgcgctcggcattcgtcgatctgctcggcggccggtcggcgatcctgcctgtcatccgc
ccgctcggtgaaaccgacgatgacagcggctatttcgacgaggtgctgccgacgacgatc
gacctcgcccagccgctgtcgaatactgcgcggctgctggaactggcgcgcctgatcctt
gcctggcgcaacaaactgccggagatcgtccgccatattcattcggactcgccgctggtc
gcgccggcaagcccggcggatgcgatctggctcgcccgcaatctcgccgagctgatcgat
tccatcgaaaccgaggatctcgactggtcggaactgtcgaagctcgacaccggcgattat
gccgcctggtggcagctgaccgccgagtttctgcagatcgccagcgccttttggccggcg
cggctttccgaactcggcaaatcttcgccggcacggcacagaaacgccattctcagggcc
gaagcggcccagctttcggcgaccaagcccggcggtccgatcatcatcgccgggtcgaca
ggttcggttccggcgactgccgatctgatcgccgccgtcgcccatctgtccgaaggcgtg
atcgtgcttccgggcctcgatctcgccatgccggaaggacattggcagatggtcgcgccc
gaaccggcgccgggccagcatctcaatccggccagccggagccatccgcaatacggactg
tcatcgctgctgaagaggctaaggctgacccgggccgatgtcagcatccttgacagaccg
gaggccgatcttgaccggcgcgccgaaatcctgtcccgggcgcttgccccggcagaggcg
accagcgattggggaacatggaagagcgagctccccgggggagcgctgacttcggccttc
aacgacgtttcgctgatcgaagccgccaacgagcgcgaggaagcaaccgcgattgccgtc
gcgctcagactggcgctggaacggccggggcaggacggcgagagccgggcagccctgatc
acgccggaccgcaacctcgcccgtcgggtgatggcggagctttcacgcttcggcatcctc
gccgacgattcggccggcacgccgctttcggccacgccgcagggcagcttgctgcaattg
ctgctggaggcggcgctgcgcccgggtgatccggtggcgatcgtctcactgctcaaacat
cctctggcccgcttcggcctcgaacgcgacgccctgatttccgccaccgaaacgctcgag
cttctggcgctgcgcggcggcgtgaccgaggtggatatcagcgcgctcgaggtgcttctg
acccatcagcttgccgaacaggccctggatcggcacgcaccgcaatggcgaaaggcgctt
cccgccgacgccgccaatctcgcatccgagcttgcccgccggattacccaggcgaccgag
cctctcgcctctgcgctcttccggcaccggccggaggatcgcggcaagacggcgagtttc
acgctgtccgaatgggccgcgcgtaccggccgtgctctcgaagcggtcgcggccgatccg
caaggcaatcttgccgatctctggtcgaacgaggcgggggacgcacttgcctcccttctc
ggcgaagtgatcgacacggacgggcagatggaggccgacgggccgcaatggatcgacatc
atggcggcgctcgccgccggccatgcggtgaaaccacgggcgctcagccatcccaggctg
ttcatcttcggcacgctggaagcccggctgcagagcgtcgatacgctgatcctcggcgga
ctgaacgaaggctcatggccggggcagagcgccaacaatcccttcattccgcgaatgatg
aagacggagatcgggctcgaaccgccggagcggcgcatcggccagctggcgcatgatttc
gagatggcgaacggcacccgccacctgatctattccagggcgctgcgtcagggctcgacg
ccgacggtcgcctcgcgctggctgcagcggctgctggcgctgggcggggaggcgctcgaa
gcggaactcaaggggcgcggcagccggttcttgcaatgggccggtctcatcgatcgggga
gagagccaggcgccggcgcaacggccttcaccgaaaccgccgctggcgctgcagccgaaa
tcctactccttcagcgaggtcggacggctgcgccgcgatccctatgccatctatgcccgc
cgcatcctgcggctggatccggtcgacgcgttcaatcgcgaccccggcgcagctgaacgc
ggtacgctctatcacacgatcatcgaccggttcatccgcgcggcgcatgtggccggcacg
ccggaggcggcagcagcgatggagcttatcctgaccgagcttttcgacatggaaaagctg
ccgccgcatatcgatgccgtatggcggccgcgttttcgggaagtggctcgcgccttcctc
gaatgggaggccggacgacggccagccatccgccggacgctgacggaagtgcgcggcggc
gtggagctggaggcgatcaatatccggctcaatggcgtcgcggaccggatcgacattacc
gggccgaacgccgccgacatcatcgactacaagaccggctacaacccctcgccggcgcag
gcacgcgcgcttctcgatccgcagctcgcgctggaagccgcggccttgcgcgccggcgcc
tttcgcgatgccggcagccttacgccgcaggatctgctttatgtccgcctgcgtcccgga
aaccgattccaggtcgatatggtcaacaatgaaaacgccgcccgcagcgacaaggcgaaa
tcggcaatcgaccttgccgaggaatcggtcgaccagctgatcaagttcgtcagcctgctg
caatccggcgaaaaaggctttacctcgcggctcatcccggcgcagcaatttgatttcggc
ggcgactacgatcatctcgcccgcgtctccgaatggtcgacggccgagaatgaggaaggc
ggcggcgatgagtga
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