Rhizobium sp. Kim5: Kim5_CH00053
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Entry
Kim5_CH00053 CDS
T05501
Symbol
glcB
Name
(GenBank) malate synthase G
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00620
Pyruvate metabolism
rhk00630
Glyoxylate and dicarboxylate metabolism
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
rhk01120
Microbial metabolism in diverse environments
rhk01200
Carbon metabolism
Module
rhk_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Kim5_CH00053 (glcB)
00630 Glyoxylate and dicarboxylate metabolism
Kim5_CH00053 (glcB)
Enzymes [BR:
rhk01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
Kim5_CH00053 (glcB)
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Gene cluster
GFIT
Motif
Pfam:
MS_TIM-barrel
MSG_insertion
MS_C
MS_N
DUF6986
DUF7465
Motif
Other DBs
NCBI-ProteinID:
ARQ56188
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Position
52109..54280
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AA seq
723 aa
AA seq
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MSRIDKNGLAVEAVLHDFLVQEVLPGLAIDADKFFADFSAIVHDLAPKNRALLKKRDELQ
LKIDDWYRQHGAPTDMDDYQSFLRAIGYLLPEGSDFQVSTQNVDPEIASIAGPQLVVPVM
NARYALNAANARWGSLYDALYGTDAIPESDGAEKGKRYNPKRGEKVIAWVRDFLDASVPL
QESSWKDVGSFAVRDGALVIKSVDGEQAMLRDAGHFAGHRGDAAAPTHLLLKNNGIHIEI
VIDPATAIGKTDPAHISDVWLESAITTIMDCEDSIAAVDAEDKVVAYRNWLGLMKGDLQE
EVAKGDASFIRKLNPDLEYRGPDGTAFELHRRSLMLVRNVGHLMTNPAILDRDGNEVPEG
IMDAVITGLIALYDIGPAGRRKNSRTGSMYVVKPKMHGPEEVAFAVEIFSRVEDALGVAR
NTIKMGIMDEERRTTVNLKECIRAARERVVFINTGFLDRTGDEIHTSMEAGPMIRKGDMR
QAAWISAYENWNVDIGLECGLAGHAQIGKGMWAMPDLMAAMLEQKIAHPKAGANTAWVPS
PTAATLHATHYHRVNVARVQQGLKDRARAKLSDILSVPVAVRPNWSQEEIQRELDNNAQG
ILGYVVRWVDQGVGCSKVPDINNVGLMEDRATLRISAQHMANWLHHKVVSEAQIVETMKR
MATVVDKQNQQDPAYRPMAGNFDGSIAFQAALELVLKGREQPNGYTEPVLHRRRLELKAK
QAG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtattgataagaacggtcttgccgtcgaagccgtccttcatgatttcctcgtc
caggaggttctgcccggtctggcgatcgatgcggacaagttctttgccgatttttcagcg
atcgtccatgatctcgcgcccaagaatcgggcgctgctgaagaagcgcgacgagttgcag
ctcaagatcgacgactggtatcgccagcacggcgctccgaccgatatggatgactaccag
tctttcctgcgcgcaatcggctatctcctgcctgaggggtcggacttccaggtttcgaca
cagaatgtcgatcccgagatcgcctcgatcgccggtccgcagctcgtcgttcccgtcatg
aacgcgcgttatgccctcaacgccgccaatgcccgctggggttcgctttatgatgcgctc
tatggcacggacgccattcccgagagcgacggcgccgaaaagggcaagcgatacaatccg
aagcgcggcgagaaggtcatcgcctgggtgcgcgatttcctcgatgcatcggtgccgctg
caggagagcagctggaaggatgtcggcagcttcgccgttagggatggcgcgcttgtcatc
aaatcggtcgacggcgaacaggcaatgctcagggatgccgggcattttgccggacatcgc
ggcgatgccgccgctcctacgcatcttcttctgaagaacaacggcatccacatcgagatc
gtcatcgatccggcaacggcgatcggcaagaccgatccggcccatatttccgatgtctgg
ctcgaatcggcaatcaccacgatcatggactgcgaggattcgattgccgccgtcgacgcc
gaggacaaggtcgtcgcctaccgcaactggctcggcctgatgaagggcgatctgcaggaa
gaagtcgcaaagggcgacgcgagctttatccgcaagctcaaccccgatctggaatataga
ggtccggatgggaccgccttcgaactgcatcgccgctcgctgatgctggtgcgcaatgtc
ggccacctcatgaccaacccggccattctcgaccgtgacggcaacgaagtgcccgagggc
atcatggatgccgtcatcaccggcctgatcgcgctctacgatattggcccggccggccgc
aggaaaaattcccgcaccggctcgatgtatgtggtcaagccgaagatgcatggaccggaa
gaagtcgccttcgccgtcgagatcttctcgcgggtcgaggatgcgcttggggtggcgcgc
aacaccatcaagatgggcattatggacgaggagcgccgcacgacggtcaatctcaaggag
tgcatccgcgccgcccgcgagcgcgtcgtcttcatcaataccggcttcctcgatcgcacc
ggcgacgagattcatacctcgatggaagctggtccgatgattcgcaagggtgacatgcgc
caggccgcctggatatcggcctatgagaactggaatgtcgatatcggcctcgaatgcggc
ctcgccggccatgctcaaatcggcaagggcatgtgggcgatgccggatctgatggcggcg
atgctggagcagaagatcgcccatcccaaagccggcgccaacaccgcctgggtgccgtcg
ccgacggctgcgacgcttcacgcgacgcattatcatcgcgtcaacgtcgcccgtgtccag
caggggctgaaggatcgtgcccgcgccaaactctccgacattctctcggtgccggtcgcg
gtgcggccgaactggtctcaggaggaaatccagcgcgagctcgacaacaacgcgcagggc
atcctcggctacgtcgtgcgctgggtcgatcagggcgtcggttgctcgaaggtgcccgac
atcaacaatgtcggcctgatggaggatcgcgccactttgcgcatttcggcccagcacatg
gcgaactggctgcatcacaaggtggtcagcgaagctcagatcgtcgaaacgatgaagcga
atggccaccgttgtcgacaaacagaaccagcaggaccctgcctatcggccgatggccggc
aatttcgatgggtcgatcgctttccaggccgctctcgagctggtgttgaagggcagggaa
cagccgaacggctataccgagccggtgcttcaccgccgccgcctcgagctcaaggccaag
caggccggttga
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