Rhizobium sp. Kim5: Kim5_CH00128
Help
Entry
Kim5_CH00128 CDS
T05501
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhk03016
]
Kim5_CH00128 (truB)
Enzymes [BR:
rhk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Kim5_CH00128 (truB)
Transfer RNA biogenesis [BR:
rhk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Kim5_CH00128 (truB)
Prokaryotic type
Kim5_CH00128 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Zf-C2H2_ZNF451_5th
Motif
Other DBs
NCBI-ProteinID:
ARQ56255
LinkDB
All DBs
Position
complement(136366..137298)
Genome browser
AA seq
310 aa
AA seq
DB search
MSKPRKPKGRPISGWLILDKPVDFGSTEAVSKLKWLYKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVSWGEERATDDLEGDVTQSSERRPTEQQIRDILPRYIGTI
SQVPPQFSAIKIAGERAYDLARDGEAVEIPSREVEIFRLTLLACPDANTAHFEVECGKGT
YVRALARDFGRELGCYGHISGLRRTFVAPFQEEAMVPLANLVALEAIEDMDERLAALDAL
LIDTCEALSALPHLVINDDQAHRLKMGNPILVRGRDAPIAESEAYATARGRLIAIGEIGQ
GEFRPKRVFA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacccaagggccggccgatttccggctggctgatcctcgacaag
ccggtggatttcggctcgacggaagccgtttccaagctcaaatggctctacaaggcgcag
aaggccggccatgccggcaccctcgacccgcttgcctccggcatgctgccgatcgcgctc
ggcgacgcgaccaagaccgttccctatgtgatggacggccggaaaatctatgagttcacc
gtcagctggggcgaggagcgcgctaccgacgatctcgaaggcgatgtgacccagagctcg
gaaagacgcccgaccgagcagcagatccgcgatatcctgccccgctatatcggcacgatc
agccaggtgccgccgcagttttccgccatcaagatcgcaggtgaacgcgcctatgatctg
gcccgcgacggggaagccgtcgagattccctcacgcgaagttgagatattccggctgacc
ctgcttgcctgcccggatgcgaataccgcgcatttcgaagtagaatgcggcaagggcact
tatgtccgggcgcttgcacgcgatttcggccgcgagctcggctgctacggccatatatcg
ggcctgcggcgcactttcgtcgcgcctttccaggaagaagccatggtgccgcttgccaat
ctcgtggcgctcgaagcgatcgaggacatggatgagcggctcgccgccctcgacgcattg
ctgatcgacacatgcgaggcgctttccgccctgcctcacctcgtcatcaacgacgaccag
gcgcaccggctgaagatgggtaatccgatcctggtgcgcggccgcgatgcgccgattgcc
gaaagcgaagcttatgctacggctcgcggcaggctgatcgcgatcggcgagatcggccag
ggcgagtttcgcccaaagcgggtttttgcctga
DBGET
integrated database retrieval system
