Rhizobium sp. Kim5: Kim5_CH00352
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Entry
Kim5_CH00352 CDS
T05501
Name
(GenBank) protease secretion system ABC transporter ATP-binding protein PrtD
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Kim5_CH00352
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_CH00352
02044 Secretion system [BR:
rhk02044
]
Kim5_CH00352
Transporters [BR:
rhk02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Kim5_CH00352
Secretion system [BR:
rhk02044
]
Type I secretion system
Multiple protein transporter
Kim5_CH00352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_25
AAA
AAA_16
NACHT
RsgA_GTPase
Zeta_toxin
AAA_30
AAA_22
nSTAND3
AAA_29
TsaE
Motif
Other DBs
NCBI-ProteinID:
ARQ56472
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Position
complement(345369..347114)
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AA seq
581 aa
AA seq
DB search
MKNNQPPPALQVVMKEARRAIRPLIWFSGGINVLMLTGALYMLQVYHRVLSSHSLETLLM
LSLMAAGALAAMAGLEVVRGRLLATVGAWMNARLAPVLLTASVEYAASAPGQANARPLRD
LDQVRNFFTSPSIFPILDAPWAPLFFAAIFFMHPWLGWLALSGGAVLFALALLNEWLTRK
PLTEATSAQSRAYTQAEAAIRNAEVVQAMGMLKPLLEGWKVQQDEANRGQVIAANRGGII
SAIARCHRLALQIGILGLGAYLVLRNEASPGIMVSASILMGRALSPVEQAIGTWKATVGA
RAAYRRLTAVAGQHPEATPVLALPRPTGRFEADNIVLARQGGEHILKGINFRLEPGESMA
LIGQSGAGKTSLARILAGAWRPSGGRALLDGMDVAQWAAEDRGHHVGYLPQDIELFAGNV
CENICRFATVSPVVFDKAVKAARLAGVHDLIKGLPRGYLTEIGESGAVLSGGQRQRIGLA
RALYGDPALIILDEPNSNLDREGEEALIAALGTVKAAGTTVILIAHRPNIMETVDKILVL
NRGQQDLFGPRDHVFNELAARVRKVAQMPTIVAKQQGTKQP
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaaccagccgcccccggcgcttcaggtggtgatgaaagaagctagacgagct
atccggccgcttatctggttcagcggcggcatcaacgtgctgatgctgaccggggcgctt
tacatgctgcaggtttatcaccgcgtcttgtccagccacagcctcgagacgctgctgatg
ttatcgctgatggcggcaggcgcacttgcggccatggcggggctggaggtggtgcgcggt
cgccttctggcaaccgtcggagcgtggatgaacgcgcggctggcgcccgttctgctgacg
gcatcggtggaatacgccgcctcggcgcccggccaagccaatgcccgcccgctgcgcgac
ctcgatcaggtccggaatttcttcaccagcccgagcatcttcccgatcctcgatgcgcct
tgggcgccgctgtttttcgccgccatattcttcatgcatccctggctgggctggctggcg
ctgtcgggcggggcggtgctgtttgcgctggccctgctcaacgaatggctgacccgcaag
ccgttgaccgaggcgaccagcgcacagtcgcgggcctacacccaggccgaggcagcgatc
cgcaacgccgaggtcgtgcaggcaatgggcatgctgaagccgctgctcgagggctggaag
gtgcagcaggacgaggcaaacaggggccaggtcatcgccgccaaccgcggcggcatcatc
tcggccattgcccgttgccaccggctggctctgcaaatagggatattaggcctcggagcc
tatctcgtcctgcgcaacgaggcttccccggggatcatggtctccgcctccatcctgatg
ggccgcgcgctatcgccggtcgagcaggcaatcggcacgtggaaggcgacggtcggcgcg
cgtgccgcctaccggcgtctcaccgccgtcgccggccagcaccccgaggccacgccggtt
ctggcactgccgcgaccgacaggccggttcgaggccgacaatatcgtgcttgcccgacag
ggcggcgaacatattctgaaagggatcaacttccgtctcgagccgggtgaatccatggct
ttgatcggccagagcggggccggcaagaccagcctggcacgcatactggccggggcctgg
cgcccttccggcgggcgggccttgctcgatggcatggatgtcgcccaatgggcggcggag
gaccgcggtcatcatgtcggctacctgccccaggacatcgagcttttcgccgggaatgtc
tgcgaaaatatctgccgcttcgcgacggtcagccccgtggtcttcgacaaggcggtcaag
gcagcgcggctggcgggcgtccacgatctgatcaaagggctgccgaggggttatctgacc
gagatcggcgaatccggcgcggtgctgtcgggcggacagcgccagcgcatcggcctggcg
cgagcgctctacggcgatccggcgctcattatcctggacgagcccaactcgaacctcgac
cgagagggtgaggaggccttgatcgcagcgctcggcacggtcaaagcggcgggcacgacc
gttatcctgatcgcgcaccgaccgaacatcatggaaaccgtcgacaagatactggtcctc
aaccgcggccagcaggacctgttcggtccgcgcgaccatgtcttcaatgaactcgccgca
cgcgtccgcaaggtcgcacagatgccgacgatcgtggcgaagcagcaaggaacgaaacag
ccatga
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