Rhizobium sp. Kim5: Kim5_CH00419
Help
Entry
Kim5_CH00419 CDS
T05501
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhk03032
]
Kim5_CH00419 (ihfB)
03036 Chromosome and associated proteins [BR:
rhk03036
]
Kim5_CH00419 (ihfB)
03400 DNA repair and recombination proteins [BR:
rhk03400
]
Kim5_CH00419 (ihfB)
DNA replication proteins [BR:
rhk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Kim5_CH00419 (ihfB)
Chromosome and associated proteins [BR:
rhk03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Kim5_CH00419 (ihfB)
DNA repair and recombination proteins [BR:
rhk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Kim5_CH00419 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Regnase_1_C
Motif
Other DBs
NCBI-ProteinID:
ARQ56538
LinkDB
All DBs
Position
complement(418885..419184)
Genome browser
AA seq
99 aa
AA seq
DB search
MIKSELVQIVAARNPHLYHRDVENIVNAVLDEITDALAAGNRVELRGFGAFSVKNRPSRS
GRNPRTGDTVFVEEKWVPFFKTGKELRERLNPGQADEED
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaatccgaactggtgcagattgttgcggcacgcaacccgcatctctatcaccgc
gacgtcgaaaacatcgtcaacgcggttctcgacgagatcaccgatgcactggccgcgggc
aaccgcgtcgaattgcgcggcttcggcgcgttttcggtcaagaaccgcccctcccgctcc
gggcgcaacccgcgcaccggcgataccgtcttcgtcgaggagaagtgggttccctttttc
aagaccggcaaggagctgcgcgagcggctcaatcccggccaggccgacgaagaggattga
DBGET
integrated database retrieval system
