Rhizobium sp. Kim5: Kim5_CH00436
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Entry
Kim5_CH00436 CDS
T05501
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhk03016
]
Kim5_CH00436 (truA)
Enzymes [BR:
rhk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Kim5_CH00436 (truA)
Transfer RNA biogenesis [BR:
rhk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Kim5_CH00436 (truA)
Prokaryotic type
Kim5_CH00436 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ARQ56555
LinkDB
All DBs
Position
433402..434208
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AA seq
268 aa
AA seq
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MPRYRMTVEYDGGPYVGWQRQENGPSVQGALEAAVLSLTGETVSVRGAGRTDSGVHAMGQ
VIHVDLSKEWSPYQLQNALNAHLRLAGERVSILDVEAVPEFFDARFSALRRHYLYRIVSR
RAPLALEAGKAWWVPKTLDHEVMHAAAQRLVGRHDFSTFRSAHCQANSPVRTLDRLDVTR
SGALIEIRATAQSFLHNQIRSFAGTLKLAGEGKWTPDDVEAALEARNRKACGPVAPPDGL
YFLQVDYPEVITDRRRPLTDTDDGDDLS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgttaccgcatgaccgtcgaatatgacggcggcccctatgtcggctggcagcgg
caggagaacggtccgtcggtgcaaggtgcgctcgaagccgcggtgctgtcgttgaccggc
gagaccgtttcggtccgcggcgccggccgcaccgattccggcgtccacgccatgggacag
gtgattcatgtcgatctttccaaggaatggtcgccctatcagctgcagaatgcgctgaat
gcgcatctgaggcttgccggcgagcgcgtctccattctcgacgtcgaggcggttcccgaa
ttcttcgatgcccgcttctcggcgctccgtcgccattatctctaccgtatcgtcagccgc
cgggcgccgctggcgctcgaagccggcaaggcctggtgggtgccgaagacactcgaccat
gaggtcatgcatgccgccgcccagcgactggtcggccggcacgatttctccaccttccgc
tccgcccactgccaggcaaacagcccggtgcgcaccctcgaccggctcgacgtgacgcgc
agcggcgcgctgatcgaaatccgcgccaccgcgcagagcttcctccacaaccagatccgt
tccttcgccggcacgttgaagctcgccggcgaaggcaagtggacgcccgacgatgtcgag
gcggcgctcgaagcgcgcaaccgcaaggcctgcggcccggtggcgccgcccgacgggctt
tatttcctgcaggtggattatcccgaggtgatcaccgaccgccgcaggccgctcactgac
accgatgacggtgacgatctatcgtag
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