Rhizobium sp. Kim5: Kim5_CH00508
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Entry
Kim5_CH00508 CDS
T05501
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00061
Fatty acid biosynthesis
rhk00071
Fatty acid degradation
rhk01100
Metabolic pathways
rhk01212
Fatty acid metabolism
rhk02024
Quorum sensing
rhk04146
Peroxisome
Module
rhk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Kim5_CH00508 (fadD)
00071 Fatty acid degradation
Kim5_CH00508 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Kim5_CH00508 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Kim5_CH00508 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhk01004
]
Kim5_CH00508 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhk04147
]
Kim5_CH00508 (fadD)
Enzymes [BR:
rhk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Kim5_CH00508 (fadD)
Lipid biosynthesis proteins [BR:
rhk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Kim5_CH00508 (fadD)
Exosome [BR:
rhk04147
]
Exosomal proteins
Exosomal proteins of breast milk
Kim5_CH00508 (fadD)
Exosomal proteins of breast cancer cells
Kim5_CH00508 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ARQ56623
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All DBs
Position
complement(504477..506177)
Genome browser
AA seq
566 aa
AA seq
DB search
MSSISVHPNGAKADKPWLATYPDMVPAELPPMEHASLVELLEKSCARYADRTVFSSMGKA
MSYRELDDQTRKVAAWLQSIGLEKGDRVAVMMPNVLQNPVATYAILRAGLVVVNVNPLYT
PRELEHQLRDSGARAIFVLENFARTVEQVLNKTDLRHVVVTSLGEMLGAKGLIVNFVVRK
VKKLVPSWSIPQHKSFSQVLREGAKKSLQPVALTGGDVAFLQYTGGTTGIAKGAVLTHQN
LLANKLQLSLWLRSAFQRKKQPEVLNFLCALPLYHIFALTVNSLMGMSLGAHNILIANPR
DIPGLVKEFEKSNIHIFPGLNTLFNALLNNADFAKLDFSSLIMSLGGGMAVQRPVAERWL
KTTGTAITEGYGLSETSPVATANRFDSIEFTGSIGLPIPSTELDIRDEEGRPLPLGEIGE
ICIRGPQVMAGYWQKPEETARVMTADGYFRTGDMGFMDERGYTKIVDRKKDMILVSGFNV
YPNEIEEVAAMHAGILEAAAIGVPDGHSGEAVKLFVVRKDPNLTEAEVKAHCIANLTNYK
RPRFIEFRTELPKSPVGKILRKDLRD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatttccgtccatccgaacggagcaaaagccgacaagccctggcttgccacc
tatccggatatggttccggccgaactgccgccgatggaacatgcctcgcttgtcgaactc
ttggaaaagtcctgcgcccgttacgccgatcggacggttttttccagcatgggcaaggcg
atgagctaccgcgagctggacgaccagacgcgcaaggtcgccgcctggctgcagagcatc
gggctcgagaagggcgaccgcgtcgcggtgatgatgccgaacgtcttgcagaacccggtc
gcgacctatgcgatcctgcgcgccggcttggtggtcgtcaacgtcaacccgctctatacg
ccgcgcgaactcgaacaccagctgcgcgattccggcgccagggcgatcttcgtgctggag
aatttcgcccgcacggtcgagcaggtcctgaacaagaccgacctgcgccatgtcgtcgtc
acctcgctcggcgaaatgctcggggccaaggggctgatcgtcaacttcgtcgtgcgcaag
gtgaagaagctcgttccctcctggtcgatcccgcaacataagagcttcagccaggtgctg
cgcgaaggcgcaaaaaagagcctccaaccggtggcgcttaccggcggcgacgtcgccttc
ctgcaatataccggcggcacgacaggcattgccaagggcgcggtgctgacgcatcagaac
ctgctcgccaacaagctgcagctgtcgctctggctgcgctcggccttccagcgcaagaag
cagcccgaagtgctgaatttcctctgcgccttgccgctctatcacatcttcgcgctgacg
gtgaattcgctgatgggcatgtcgctcggcgcccacaacatcctgatcgccaatccgcgc
gacattcccggcctcgtcaaagagttcgaaaaatcgaacatccatatcttcccgggcctc
aacacgctgttcaacgcactgctgaacaatgccgatttcgccaagctcgacttctcctcg
ctaatcatgtcgctcggcggcggcatggccgtccagcgcccggtcgccgaacgctggctg
aagacgacaggcacggcgatcacggaaggctacgggctttcggaaacatcgccggtcgcc
accgccaaccgcttcgattcgatcgagtttaccggctcgatcggcctgcctattccttcc
accgaactcgacattcgcgacgaggagggccgtccgctgccgctcggcgagatcggcgaa
atctgcatccgcggaccgcaggtgatggccggctattggcagaagccggaggaaacggcg
cgggtgatgacggccgacggctatttccgcacgggcgacatgggtttcatggacgaacgc
ggctacaccaagatcgtcgatcgcaagaaggacatgatcctcgtttccggcttcaacgtc
tatccgaacgagatcgaggaggttgccgccatgcatgccggcatcctcgaagccgccgcg
atcggcgtgccggacgggcattcgggcgaagcggtcaaactcttcgtggtcaggaaggac
ccgaacctgacagaagccgaggtgaaggcccattgcatcgccaatctcaccaactacaaa
cgcccgcgcttcatcgaattccgcaccgagctgccgaagtcgccggtcggcaagatcctg
cgcaaggatctgcgcgactga
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