Rhizobium sp. Kim5: Kim5_CH00593
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Entry
Kim5_CH00593 CDS
T05501
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00071
Fatty acid degradation
rhk00280
Valine, leucine and isoleucine degradation
rhk00310
Lysine degradation
rhk00362
Benzoate degradation
rhk00380
Tryptophan metabolism
rhk00410
beta-Alanine metabolism
rhk00640
Propanoate metabolism
rhk00650
Butanoate metabolism
rhk00907
Pinene, camphor and geraniol degradation
rhk00930
Caprolactam degradation
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
rhk01120
Microbial metabolism in diverse environments
rhk01200
Carbon metabolism
rhk01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Kim5_CH00593 (fadJ)
00650 Butanoate metabolism
Kim5_CH00593 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
Kim5_CH00593 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Kim5_CH00593 (fadJ)
00310 Lysine degradation
Kim5_CH00593 (fadJ)
00380 Tryptophan metabolism
Kim5_CH00593 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Kim5_CH00593 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Kim5_CH00593 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Kim5_CH00593 (fadJ)
00930 Caprolactam degradation
Kim5_CH00593 (fadJ)
Enzymes [BR:
rhk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Kim5_CH00593 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Kim5_CH00593 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Kim5_CH00593 (fadJ)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
GIDA
NAD_binding_8
Pyr_redox
2-Hacid_dh_C
UDPG_MGDP_dh_N
NAD_binding_7
Pyr_redox_2
ApbA
FAD_binding_3
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
ARQ56705
LinkDB
All DBs
Position
590303..592519
Genome browser
AA seq
738 aa
AA seq
DB search
MSTYTNFTLETDADGIALVTWDMPGKSMNVFTAEVMQELNAIIDATTADTAVKGVVFTSG
KSSFSGGADLSMIKSMFSSYQEEKAKSPQTAVQTLFGLVGRMSGLFRKLETSGKPWVSAI
NGTCMGGAFELSLACHGRVASNAKSVKIALPEVKVGIFPGAGGTQRVSRLANAQDALQMM
TTGQSLTGSRAKAMNLVHQVVEPDQLIPAAKQMIKDGLKPVAPWDEKGFKLPGGGIWTPA
SAQLWPAAPAILRRETSGNYPAALAILKCVYEGLQVPFDTGLKIEQRYFTEVLQTREAFS
MIRSLFISMQELGKGARRPAGIPKTELKHVGVVGAGFMGASIAYVTAAAGLPVTLIDRDM
EAAAKGKAVCEGLVKDSVGKGRFTQDEAAALLSRITPAADYAGLATADLVIEAVFEDREV
KKSVIEAVEAVLPEGAIFASNTSTLPITGLAKNSKRPADFIGIHFFSPVEKMMLTEVILG
KETDDKALAVALDYVAAIKKTPIVVNDTRGFFVNRCVLRYMSESYDMLIEGVPPAMIENA
AKMAGMPVGPLALNDEVAIDLSLKILKATVADLGEKAIDPRHMELISRMVEKEGRFGRKN
SKGFYDYPPKPAKKSLWPELKDFYPQKQADEVDVAVLKQRFLVTIALEAARTVEEGIVTD
PREADVGSILGFGFAPYTGGALSYIDGMGVKAFVELAEKLALAYGDHFKPTPLLKDMAAK
GETFYGRFDPYAGAKAAA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctacaccaatttcacgctcgaaaccgacgccgatggcatcgctctcgtcacc
tgggacatgcccggcaaatcgatgaacgtcttcaccgccgaggtgatgcaagagctgaac
gccatcatcgacgcaaccacggctgacaccgccgtcaagggtgtcgtcttcacctcgggc
aaatcctccttctccggcggcgccgatctttcgatgatcaagtcgatgttcagctcctat
caggaggagaaggccaagagtccgcagacggcggtgcagacgctgtttggtttggtcggc
cggatgagcggcctgttccgcaagctcgaaacctcgggcaagccgtgggtgtcggcgatc
aacggcacctgcatgggcggcgctttcgaactgtcgcttgcctgccatggccgtgtcgcc
tccaatgccaagagcgtcaagatcgcgctgcccgaggtcaaggtcggcatcttccccggc
gccggcggcacccagcgcgtgtcgcggctcgccaatgcccaggatgcgctgcagatgatg
acgacgggccagtcgctcacgggctcgcgcgccaaggcgatgaacctcgtgcatcaggtg
gtcgagccggatcaactgatcccggccgccaagcaaatgatcaaggacgggctgaagccg
gtcgccccgtgggacgagaagggcttcaagctgccgggcggcggcatctggacgccggcc
tccgcccagctctggccggccgcaccggcaatcctgcgccgcgaaacctcaggcaattac
cccgccgcgctcgccatcctgaaatgcgtctatgaaggcctgcaggtaccgttcgacacc
ggcctgaagatcgagcagcgttatttcaccgaggtgctgcagacccgcgaagccttctcg
atgatccgctcgctgttcatctccatgcaggagctcggcaagggcgcccgccgtcccgcc
ggcattccgaagaccgaactcaaacatgtcggcgtcgtcggcgccggtttcatgggcgcc
tcgattgcctatgtcaccgccgccgccggtctcccggtgacgctgatcgaccgcgacatg
gaggctgccgccaagggcaaggccgtctgcgaaggcctcgtcaaggattccgtcggtaag
ggacgctttacgcaggacgaggcggcggcgcttctctcccgcatcacgcctgccgccgac
tatgccggtctcgccaccgccgatctcgtcatcgaggcggtgttcgaagatcgcgaagtg
aagaaatcggtcatcgaggctgttgaagcggtgctcccggaaggggcgattttcgcctcc
aatacctcgaccctgccgatcacgggtcttgccaagaattccaagcgcccggccgatttc
atcggcatccacttcttctcgcccgtcgaaaagatgatgctgaccgaggtcatcctcggc
aaggagaccgacgacaaggcgctcgccgtcgcgctcgactatgtcgcggcgatcaagaag
acgccgatcgtcgtcaacgacacccgcggtttcttcgtcaatcgctgcgttctgcgctac
atgtcggaaagctacgacatgctgatcgaaggcgtgccgcccgccatgatcgaaaatgcc
gccaagatggccggcatgccggtcggtcccctggcgctcaatgacgaggtcgccatcgac
ctgtcgctgaagatcctcaaggccacggtcgccgatcttggcgagaaggccatcgacccc
aggcatatggagctcatctcccgcatggtcgaaaaggagggccgcttcggccgcaagaac
tccaagggtttctacgactatccgccgaaaccggcgaagaagtcgctttggcccgagctc
aaggacttctatccgcagaagcaggcggatgaggtcgatgtcgccgtcctcaaacagcgt
ttccttgtcaccatcgcgctcgaagccgcccgcaccgtcgaggaaggtatcgtcaccgat
ccgcgcgaagccgacgtcggctcgatcctcggcttcggcttcgcgccctataccggcggg
gcgctgagctatatcgacggcatgggtgttaaagccttcgtcgagttggcggagaagtta
gcattggcttacggagatcacttcaagccgacgccgctgctgaaggacatggccgccaag
ggcgagacgttttatgggcggttcgatccctatgcgggggcgaaggcagcggcgtaa
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