Rhizobium sp. Kim5: Kim5_CH00638
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Entry
Kim5_CH00638 CDS
T05501
Name
(GenBank) ATP-dependent DNA helicase Ku-type protein
KO
K10979
DNA end-binding protein Ku
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Kim5_CH00638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhk03400
]
Kim5_CH00638
DNA repair and recombination proteins [BR:
rhk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Kim5_CH00638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ARQ56748
LinkDB
All DBs
Position
635578..636381
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AA seq
267 aa
AA seq
DB search
MARQTFWKGYLKLSLVTASVSLTPATTESNKVHFHVLNRQTKNRVESRYVDSVTHKPVAD
RDQVKGYPRGEGDYVLLEDEEIEEVGLESTRTIEIDSFVPRGSIDWIWYDKPHFLAPADK
VGVEAFCVIREAMKANDVVGIARLVLYRRERAVLLEPQGKGIILWTLRYGDEVREPFAEI
NDKAKIDSKLLTLMKQLVKEETRDWSPTMVQDPIQKRLKSMIRGKQKNLKKAAPAKRPAP
VKSTGNVINIMDALKKSLAEEGERKPR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcagacattctggaagggttatctcaagctctcgctcgtcaccgcctccgtc
tcgctgacgccggcgacgaccgaaagcaacaaggtgcatttccacgtcctcaatcgccag
acgaaaaaccgtgttgaaagccgctatgtcgacagcgtcacccacaagccggtggccgac
agggaccaggtgaagggttatccgcgcggcgagggcgactatgttcttctcgaagacgaa
gagatcgaggaagtcgggctcgaaagcacccgcaccatcgagatcgacagtttcgtgccg
cgcggctcgatcgactggatctggtacgacaagccgcatttcctggcgcccgcggacaag
gtcggcgtggaagccttctgcgtcatccgcgaggcgatgaaggcgaacgacgtcgtcggc
attgcccgtctggtcctctatcgccgcgagcgtgccgtgctgctggagccgcaaggcaag
ggcattattctctggaccctgcgttatggcgacgaagtgcgcgaaccctttgccgagatc
aacgataaagcaaagatcgacagcaagcttttgacgctgatgaagcagctggtaaaggaa
gagaccagggattggagcccgaccatggtgcaggatccgatccagaagcgcctgaaatcg
atgatccgcggcaagcagaagaacctgaagaaggccgcaccggccaaaagaccggcgccg
gtgaaatcgaccggcaacgtcatcaacatcatggatgcgctgaaaaagagcctggcggaa
gaaggggaaaggaagccgcgttag
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